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The map label for this gene is yrbD [C]

Identifier: 182682268

GI number: 182682268

Start: 1939109

End: 1939645

Strand: Direct

Name: yrbD [C]

Synonym: XfasM23_1750

Alternate gene names: 182682268

Gene position: 1939109-1939645 (Clockwise)

Preceding gene: 182682267

Following gene: 182682269

Centisome position: 76.47

GC content: 51.58

Gene sequence:

>537_bases
ATGCGTGGACCAAGACTTGAATTCGCTGTGGGTACCTTTCTGCTATTAACCCTAGCCTCGCTAATGGTGCTAGCAGTCGC
ATCCACCAACCAACGCTGGAGTATGGGCAGCAACCAATACACTCTTACCGCTCACTTCACCCAAATTGGACAACTACGCA
AGCAAGCCCCGGTACGAATCAGCGGGGTTAACATCGGCCAAGTCAGTAACATCACGCTGGACCCGAAAACATTTGAATCG
GTGGTCACGCTGTCGCTAGACAAGCAATACAAGGATCTACCTGCAGACACCTCAGCCAACATTCTCACGAGTGGACTCCT
CGGCGAGAGTTACATCAATTTGCTGCCTGGCGGCGACCCGGAAGTGCTCAAACCTGGGGATCAGATCGCATTTACTCAAC
CAGCAGTGGACTTAATCCAGTTAGTCGGAAAATACATGTTCAGTGGCGGCAGCGATAAATCCACATCCAGCAACACCACC
AGCACAACCGATCACGCTGCCTCCTCTCACACAGACACTCAAGAAACTCACCAATGA

Upstream 100 bases:

>100_bases
TTTTCTACGCAAGATATTTAAAGAAATATGAAGTGAAAACCTGCTCTGATCCATCCATATCAGAGTGTTTGTTGGATCAA
AAAGTGAGATAACCATCGTT

Downstream 100 bases:

>100_bases
AGACCACACTGTTCTACATCATGTTCGCTTACGCTCTGTCAACCGCATTTCCATCCATGATGCTGGCTCAGGCATCATCA
ATCGCCGAGGTCAACCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRGPRLEFAVGTFLLLTLASLMVLAVASTNQRWSMGSNQYTLTAHFTQIGQLRKQAPVRISGVNIGQVSNITLDPKTFES
VVTLSLDKQYKDLPADTSANILTSGLLGESYINLLPGGDPEVLKPGDQIAFTQPAVDLIQLVGKYMFSGGSDKSTSSNTT
STTDHAASSHTDTQETHQ

Sequences:

>Translated_178_residues
MRGPRLEFAVGTFLLLTLASLMVLAVASTNQRWSMGSNQYTLTAHFTQIGQLRKQAPVRISGVNIGQVSNITLDPKTFES
VVTLSLDKQYKDLPADTSANILTSGLLGESYINLLPGGDPEVLKPGDQIAFTQPAVDLIQLVGKYMFSGGSDKSTSSNTT
STTDHAASSHTDTQETHQ
>Mature_178_residues
MRGPRLEFAVGTFLLLTLASLMVLAVASTNQRWSMGSNQYTLTAHFTQIGQLRKQAPVRISGVNIGQVSNITLDPKTFES
VVTLSLDKQYKDLPADTSANILTSGLLGESYINLLPGGDPEVLKPGDQIAFTQPAVDLIQLVGKYMFSGGSDKSTSSNTT
STTDHAASSHTDTQETHQ

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=181, Percent_Identity=38.121546961326, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 19102; Mature: 19102

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGPRLEFAVGTFLLLTLASLMVLAVASTNQRWSMGSNQYTLTAHFTQIGQLRKQAPVRI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEE
SGVNIGQVSNITLDPKTFESVVTLSLDKQYKDLPADTSANILTSGLLGESYINLLPGGDP
ECCCCCCCCEEEECHHHHHHHEEEEECCHHHCCCCCCCCHHHHHHHHCHHHHHHCCCCCC
EVLKPGDQIAFTQPAVDLIQLVGKYMFSGGSDKSTSSNTTSTTDHAASSHTDTQETHQ
CCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MRGPRLEFAVGTFLLLTLASLMVLAVASTNQRWSMGSNQYTLTAHFTQIGQLRKQAPVRI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEE
SGVNIGQVSNITLDPKTFESVVTLSLDKQYKDLPADTSANILTSGLLGESYINLLPGGDP
ECCCCCCCCEEEECHHHHHHHEEEEECCHHHCCCCCCCCHHHHHHHHCHHHHHHCCCCCC
EVLKPGDQIAFTQPAVDLIQLVGKYMFSGGSDKSTSSNTTSTTDHAASSHTDTQETHQ
CCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]