Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is engA
Identifier: 182682229
GI number: 182682229
Start: 1890707
End: 1892104
Strand: Reverse
Name: engA
Synonym: XfasM23_1711
Alternate gene names: 182682229
Gene position: 1892104-1890707 (Counterclockwise)
Preceding gene: 182682230
Following gene: 182682227
Centisome position: 74.62
GC content: 53.15
Gene sequence:
>1398_bases ATGCTCCCTTTGGTCGCCCTGGTTGGACGGCCGAACGTTGGTAAGTCCACCCTGTTTAACGCGTTGACGCTGACGCGTGA TGCACTTGTACATGACCAACCCGGTGTCACCCGTGATCGCCACTATGGTGTATGCCGTATTGATGGGCAGCCTTTGTTTG CTGTCGTCGATACTGGTGGCATGGTTGGTAAGGAAGATGGCTTGGCTGGTGCTACGGCGCGTCAAGCACGTCTTGCTGTG GCTGAAGCTGATGTGGTGTTGTTTGTGGTCAACGTGCGTGAAGGTGCGTCTGCGCTTGACGACGATATCCTTGCTTGGTT ACGCAAGCTATCGCAGCCTACATTGTTGGTGATCAATAAAATTGATGGTGTGAGTGATACCACAGTGCATTCGGAGTTCG CTCACTACGGCTTTTCCGACGTGGTTCCTGTTTCTGCTGCGCATCGTCAAGGCTTGGATGACCTTATTGAACAGGTGCTT GCGTGGCTGCCTGAACGCAGTATTGGCGAGGCATTTAATGAAGATTCAGAGCGCATCCATATTGCTTTTGTCGGTCGACC GAATGTCGGTAAATCGACACTAGTGAACCGCCTGCTTGGTGAGGAGCGGATGATTGTCTCGGATGTGCCTGGCACAACCC GCGATTCCATTACAGTTGATTTGGAGCGCGATGAATTACGGTACCGTTTGGTCGATACCGCGGGCTTACGACGCAAATCG AAGGTTGAAGAGGCAGTCGAAAAATTCAGTGCCTTTAAGACCCTACAGGCGATCGAACAATGCCAAGTTGCGGTGTTGCT GTTGGATGCCGGTGAGGGTGTGACTGACCAGGATGCTACCGTGCTTGCCGCCATCTTGGATGCGGGCAAGGCCCTGGTCG TGGCGATGAATAAATGGGATGGCCTCGCTACTTACCAGAGAGAACAAGCCGAGGACTTGCTCTCGCGTAAACTCGGCTTT GTCAATTGGGCTGAGGTGGTGCGTCTTTCTGCCAAACATGGCTCGGGCTTACGTGAATTATTCAGAGCTATTCATCGTGC TCATGTTTCGGCGCTGCGTCAGTTCAGCACCAGCGAGGTGAATAAAGCGCTGGAGATCGCCTACCAAACCGCGCCGCCGC CGAGCATTCGAGGCCATGTGTCCAAATTACGTTATGTCCATCCGGCTGGAAGTAATCCGCCAACCTTCATCGTCCATGGA ACCCGCCTGAAGGTGTTACCGGATACGTACAAACGTTACCTGGAGAATTTCTTCCGTAAGCGCTTCAAACTGGTTGGCAC CCCGGTGCGTTTCCTGTTCAGAGAAGGTGACAACCCTTATGAAGGCAGGAAGAACGTATTGAGCGAACGCCAGATCCAGC GCAGACGCCGTTTGATGCGCCATGTGAAGCGTAAATAG
Upstream 100 bases:
>100_bases CCTGTCGTCGCTGACAATGTGCTTCTGGTGCAGAGTAGTAATGGAAAGCTCGCTGCTTTTCGTCTGATGCAATAACAATA ACTACGGATGTTGATGCGAT
Downstream 100 bases:
>100_bases TGAGGCTGAGTGGCCTTGTTATATGAAATGCTGCGTGGGATCGTGTCGATGCTTCATGCTTCAGTATCTAGGCTAGGGAA GGGATGATGCCTTTATTGCT
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MLPLVALVGRPNVGKSTLFNALTLTRDALVHDQPGVTRDRHYGVCRIDGQPLFAVVDTGGMVGKEDGLAGATARQARLAV AEADVVLFVVNVREGASALDDDILAWLRKLSQPTLLVINKIDGVSDTTVHSEFAHYGFSDVVPVSAAHRQGLDDLIEQVL AWLPERSIGEAFNEDSERIHIAFVGRPNVGKSTLVNRLLGEERMIVSDVPGTTRDSITVDLERDELRYRLVDTAGLRRKS KVEEAVEKFSAFKTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKALVVAMNKWDGLATYQREQAEDLLSRKLGF VNWAEVVRLSAKHGSGLRELFRAIHRAHVSALRQFSTSEVNKALEIAYQTAPPPSIRGHVSKLRYVHPAGSNPPTFIVHG TRLKVLPDTYKRYLENFFRKRFKLVGTPVRFLFREGDNPYEGRKNVLSERQIQRRRRLMRHVKRK
Sequences:
>Translated_465_residues MLPLVALVGRPNVGKSTLFNALTLTRDALVHDQPGVTRDRHYGVCRIDGQPLFAVVDTGGMVGKEDGLAGATARQARLAV AEADVVLFVVNVREGASALDDDILAWLRKLSQPTLLVINKIDGVSDTTVHSEFAHYGFSDVVPVSAAHRQGLDDLIEQVL AWLPERSIGEAFNEDSERIHIAFVGRPNVGKSTLVNRLLGEERMIVSDVPGTTRDSITVDLERDELRYRLVDTAGLRRKS KVEEAVEKFSAFKTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKALVVAMNKWDGLATYQREQAEDLLSRKLGF VNWAEVVRLSAKHGSGLRELFRAIHRAHVSALRQFSTSEVNKALEIAYQTAPPPSIRGHVSKLRYVHPAGSNPPTFIVHG TRLKVLPDTYKRYLENFFRKRFKLVGTPVRFLFREGDNPYEGRKNVLSERQIQRRRRLMRHVKRK >Mature_465_residues MLPLVALVGRPNVGKSTLFNALTLTRDALVHDQPGVTRDRHYGVCRIDGQPLFAVVDTGGMVGKEDGLAGATARQARLAV AEADVVLFVVNVREGASALDDDILAWLRKLSQPTLLVINKIDGVSDTTVHSEFAHYGFSDVVPVSAAHRQGLDDLIEQVL AWLPERSIGEAFNEDSERIHIAFVGRPNVGKSTLVNRLLGEERMIVSDVPGTTRDSITVDLERDELRYRLVDTAGLRRKS KVEEAVEKFSAFKTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKALVVAMNKWDGLATYQREQAEDLLSRKLGF VNWAEVVRLSAKHGSGLRELFRAIHRAHVSALRQFSTSEVNKALEIAYQTAPPPSIRGHVSKLRYVHPAGSNPPTFIVHG TRLKVLPDTYKRYLENFFRKRFKLVGTPVRFLFREGDNPYEGRKNVLSERQIQRRRRLMRHVKRK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=489, Percent_Identity=46.8302658486708, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI2367268, Length=191, Percent_Identity=32.4607329842932, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788919, Length=180, Percent_Identity=32.7777777777778, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6323665, Length=180, Percent_Identity=29.4444444444444, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_XYLF2 (B2I7V0)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830389.1 - ProteinModelPortal: B2I7V0 - SMR: B2I7V0 - GeneID: 6203773 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1711 - HOGENOM: HBG592135 - OMA: KCEKAFD - ProtClustDB: PRK00093 - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 51787; Mature: 51787
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLVALVGRPNVGKSTLFNALTLTRDALVHDQPGVTRDRHYGVCRIDGQPLFAVVDTGG CCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEECCC MVGKEDGLAGATARQARLAVAEADVVLFVVNVREGASALDDDILAWLRKLSQPTLLVINK CCCCCCCCCCCHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC IDGVSDTTVHSEFAHYGFSDVVPVSAAHRQGLDDLIEQVLAWLPERSIGEAFNEDSERIH CCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEE IAFVGRPNVGKSTLVNRLLGEERMIVSDVPGTTRDSITVDLERDELRYRLVDTAGLRRKS EEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEHHHHHEEEHHHHCCCHHH KVEEAVEKFSAFKTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKALVVAMNKWD HHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCC GLATYQREQAEDLLSRKLGFVNWAEVVRLSAKHGSGLRELFRAIHRAHVSALRQFSTSEV CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NKALEIAYQTAPPPSIRGHVSKLRYVHPAGSNPPTFIVHGTRLKVLPDTYKRYLENFFRK HHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCCEEEEECCEEEECCHHHHHHHHHHHHH RFKLVGTPVRFLFREGDNPYEGRKNVLSERQIQRRRRLMRHVKRK HHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLPLVALVGRPNVGKSTLFNALTLTRDALVHDQPGVTRDRHYGVCRIDGQPLFAVVDTGG CCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEECCC MVGKEDGLAGATARQARLAVAEADVVLFVVNVREGASALDDDILAWLRKLSQPTLLVINK CCCCCCCCCCCHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC IDGVSDTTVHSEFAHYGFSDVVPVSAAHRQGLDDLIEQVLAWLPERSIGEAFNEDSERIH CCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEE IAFVGRPNVGKSTLVNRLLGEERMIVSDVPGTTRDSITVDLERDELRYRLVDTAGLRRKS EEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEHHHHHEEEHHHHCCCHHH KVEEAVEKFSAFKTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKALVVAMNKWD HHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCC GLATYQREQAEDLLSRKLGFVNWAEVVRLSAKHGSGLRELFRAIHRAHVSALRQFSTSEV CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NKALEIAYQTAPPPSIRGHVSKLRYVHPAGSNPPTFIVHGTRLKVLPDTYKRYLENFFRK HHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCCEEEEECCEEEECCHHHHHHHHHHHHH RFKLVGTPVRFLFREGDNPYEGRKNVLSERQIQRRRRLMRHVKRK HHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA