Click here to switch to the map view.

The map label for this gene is yfgL [H]

Identifier: 182682230

GI number: 182682230

Start: 1892130

End: 1893365

Strand: Reverse

Name: yfgL [H]

Synonym: XfasM23_1712

Alternate gene names: 182682230

Gene position: 1893365-1892130 (Counterclockwise)

Preceding gene: 182682231

Following gene: 182682229

Centisome position: 74.67

GC content: 53.32

Gene sequence:

>1236_bases
ATGAGAGATGTTATGAAGTTCAGGAAATTTTTCACAATTGCATTATTCGCTACCGTTTTTGTTGGGTGTGGCAGTGTAAA
AAGTGTGTTTCGCGGTAAAGATGCCGATGCTAGAAAGGCTCAGGAACCTGCCGATCTTGCTGATTTCACCCCGACCGTAA
AGGTCGGCAAGCTTTGGGCAGTGGATCTTGGGAAGGGTGAGGGTCGCATTGGAGTGCGGCAACGTCCGACCGTGGTCGAT
GGCAAGGTATATGCAGCAGCCATCGGTGGTGGTGTGCTCGCACTGGATTTACACACAGGGCAGGTCTTGTGGAAGTACGT
ACCGGCTCAAGGAAGTAACGCAAAGGACAACAAGAAATTTAGTAAAAAATCGATGCTGCGTCTTGCTGGTGGCCCCGGTG
TTGGGGATGGTCTGGTGGTGATCGGTACCCTAGATGGTCAAGTGATCGCTTTGGACCAGAACGATGGTACTGAGAAGTGG
CGCGCCAATGTACCGAACGAGGTGATTGCAGCGCCAGCTGTGGCGCAGAACATGGTGTTTGTGCGCAGTAATGATGGTCG
CGTGACCGCATTCGAGGGGGCTACTGGTCAACGTCGCTGGTTCACTGAGCGCGAGTCGCCTAGCTTGACGGTTCGTGGTA
ATGCGCCGGTGATCCCTGGGACAGATTTGCTGTTCGTGGGAAATGACGACGGTACTATCAGTGCATTAGCGATGCATGAT
GGAAATTCCCTGTGGGTACAGTCTGTTGCTATGCCGGAAGGTCGTAGTGAATTGGAGCGTATGGCTGACGTTGACGGTGT
CCCTGTTCTGGAAGGAAATACTCTGTACGCAACCAGCTATAAAAACGAGACTGTTGCGATTGATGGGGCGAGCGGTCGTA
TGCTTTGGAATCGCGAGCACGGTGGAGCGGGTGGTGTCGGCGTTTCTTCCAACTATATTGTGGTGGCTGATAATGATGGC
ACCGTATGGGGCTTGGACAAGCCGACTGGAAGTGCCTCCTGGTCGCAACCTGCGTTAGCACGCCGCTTTTTGACAGGCGT
GGCGATCCAGGGAGATTACGCGGTGGTGGGTGATTACAAAGGCTATCTGCACTGGTTGCGTCTCAGTGATGGTGCACTTG
CTGCTCGCGAACGCTCTGGGAGTGCCGCTATCGTTGGGCAACCTGTCGTCGCTGACAATGTGCTTCTGGTGCAGAGTAGT
AATGGAAAGCTCGCTGCTTTTCGTCTGATGCAATAA

Upstream 100 bases:

>100_bases
ACTTGCCATGGGCGATAGTGCAGCGCCGCAGCGCCGTATTCTGGAAATTAAGTTGATGGATGTGGGCGGCACATTACCCA
CTCCTGTGGGTCCGATTTAA

Downstream 100 bases:

>100_bases
CAATAACTACGGATGTTGATGCGATATGCTCCCTTTGGTCGCCCTGGTTGGACGGCCGAACGTTGGTAAGTCCACCCTGT
TTAACGCGTTGACGCTGACG

Product: outer membrane assembly lipoprotein YfgL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MRDVMKFRKFFTIALFATVFVGCGSVKSVFRGKDADARKAQEPADLADFTPTVKVGKLWAVDLGKGEGRIGVRQRPTVVD
GKVYAAAIGGGVLALDLHTGQVLWKYVPAQGSNAKDNKKFSKKSMLRLAGGPGVGDGLVVIGTLDGQVIALDQNDGTEKW
RANVPNEVIAAPAVAQNMVFVRSNDGRVTAFEGATGQRRWFTERESPSLTVRGNAPVIPGTDLLFVGNDDGTISALAMHD
GNSLWVQSVAMPEGRSELERMADVDGVPVLEGNTLYATSYKNETVAIDGASGRMLWNREHGGAGGVGVSSNYIVVADNDG
TVWGLDKPTGSASWSQPALARRFLTGVAIQGDYAVVGDYKGYLHWLRLSDGALAARERSGSAAIVGQPVVADNVLLVQSS
NGKLAAFRLMQ

Sequences:

>Translated_411_residues
MRDVMKFRKFFTIALFATVFVGCGSVKSVFRGKDADARKAQEPADLADFTPTVKVGKLWAVDLGKGEGRIGVRQRPTVVD
GKVYAAAIGGGVLALDLHTGQVLWKYVPAQGSNAKDNKKFSKKSMLRLAGGPGVGDGLVVIGTLDGQVIALDQNDGTEKW
RANVPNEVIAAPAVAQNMVFVRSNDGRVTAFEGATGQRRWFTERESPSLTVRGNAPVIPGTDLLFVGNDDGTISALAMHD
GNSLWVQSVAMPEGRSELERMADVDGVPVLEGNTLYATSYKNETVAIDGASGRMLWNREHGGAGGVGVSSNYIVVADNDG
TVWGLDKPTGSASWSQPALARRFLTGVAIQGDYAVVGDYKGYLHWLRLSDGALAARERSGSAAIVGQPVVADNVLLVQSS
NGKLAAFRLMQ
>Mature_411_residues
MRDVMKFRKFFTIALFATVFVGCGSVKSVFRGKDADARKAQEPADLADFTPTVKVGKLWAVDLGKGEGRIGVRQRPTVVD
GKVYAAAIGGGVLALDLHTGQVLWKYVPAQGSNAKDNKKFSKKSMLRLAGGPGVGDGLVVIGTLDGQVIALDQNDGTEKW
RANVPNEVIAAPAVAQNMVFVRSNDGRVTAFEGATGQRRWFTERESPSLTVRGNAPVIPGTDLLFVGNDDGTISALAMHD
GNSLWVQSVAMPEGRSELERMADVDGVPVLEGNTLYATSYKNETVAIDGASGRMLWNREHGGAGGVGVSSNYIVVADNDG
TVWGLDKPTGSASWSQPALARRFLTGVAIQGDYAVVGDYKGYLHWLRLSDGALAARERSGSAAIVGQPVVADNVLLVQSS
NGKLAAFRLMQ

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=390, Percent_Identity=32.0512820512821, Blast_Score=207, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 43624; Mature: 43624

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDVMKFRKFFTIALFATVFVGCGSVKSVFRGKDADARKAQEPADLADFTPTVKVGKLWA
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHCCCCCCHHHCCCCEEECEEEE
VDLGKGEGRIGVRQRPTVVDGKVYAAAIGGGVLALDLHTGQVLWKYVPAQGSNAKDNKKF
EEECCCCCEECCCCCCEEECCEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCHHH
SKKSMLRLAGGPGVGDGLVVIGTLDGQVIALDQNDGTEKWRANVPNEVIAAPAVAQNMVF
HHHHHEEEECCCCCCCCEEEEEECCCEEEEEECCCCCHHHHCCCCHHHEECCCHHCCEEE
VRSNDGRVTAFEGATGQRRWFTERESPSLTVRGNAPVIPGTDLLFVGNDDGTISALAMHD
EECCCCEEEEEECCCCCCCEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEEC
GNSLWVQSVAMPEGRSELERMADVDGVPVLEGNTLYATSYKNETVAIDGASGRMLWNREH
CCEEEEEEEECCCCHHHHHHHHCCCCCEEEECCEEEEEECCCCEEEEECCCCCEEEECCC
GGAGGVGVSSNYIVVADNDGTVWGLDKPTGSASWSQPALARRFLTGVAIQGDYAVVGDYK
CCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHCEEEECCEEEEECCC
GYLHWLRLSDGALAARERSGSAAIVGQPVVADNVLLVQSSNGKLAAFRLMQ
CEEEEEEECCCCEEECCCCCCEEEEECCEEECCEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MRDVMKFRKFFTIALFATVFVGCGSVKSVFRGKDADARKAQEPADLADFTPTVKVGKLWA
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHCCCCCCHHHCCCCEEECEEEE
VDLGKGEGRIGVRQRPTVVDGKVYAAAIGGGVLALDLHTGQVLWKYVPAQGSNAKDNKKF
EEECCCCCEECCCCCCEEECCEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCHHH
SKKSMLRLAGGPGVGDGLVVIGTLDGQVIALDQNDGTEKWRANVPNEVIAAPAVAQNMVF
HHHHHEEEECCCCCCCCEEEEEECCCEEEEEECCCCCHHHHCCCCHHHEECCCHHCCEEE
VRSNDGRVTAFEGATGQRRWFTERESPSLTVRGNAPVIPGTDLLFVGNDDGTISALAMHD
EECCCCEEEEEECCCCCCCEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEEC
GNSLWVQSVAMPEGRSELERMADVDGVPVLEGNTLYATSYKNETVAIDGASGRMLWNREH
CCEEEEEEEECCCCHHHHHHHHCCCCCEEEECCEEEEEECCCCEEEEECCCCCEEEECCC
GGAGGVGVSSNYIVVADNDGTVWGLDKPTGSASWSQPALARRFLTGVAIQGDYAVVGDYK
CCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHCEEEECCEEEEECCC
GYLHWLRLSDGALAARERSGSAAIVGQPVVADNVLLVQSSNGKLAAFRLMQ
CEEEEEEECCCCEEECCCCCCEEEEECCEEECCEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]