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The map label for this gene is rsgA [H]

Identifier: 182682194

GI number: 182682194

Start: 1849332

End: 1850330

Strand: Reverse

Name: rsgA [H]

Synonym: XfasM23_1673

Alternate gene names: 182682194

Gene position: 1850330-1849332 (Counterclockwise)

Preceding gene: 182682195

Following gene: 182682192

Centisome position: 72.97

GC content: 58.76

Gene sequence:

>999_bases
ATGCTTCAAGCCATTGGCTGGCCTTGGCCGGGGCCGCCTGCTGATTCGGCGTGGCAGGCGATGTGTGCGATGTATTCGCA
GTGCCGTCCGGCACGGGTGATTGAGCAGCATCGGTCCGGTTATGTGGTGGCTGAGGCGCCGGAGGTCCCCATTAAGGTCG
AGTCGCTGCCAGCGTGGCAGCGCCGCAGTTTCCCGCCCCATGAGCGCGCGGTTGTGGGGGATTGGGTGTTGTTGGATGGT
CGTCGCATCGTGGCGTTGTTGCCGCGGCGTACAGTCATTAAGCGTTTGGCGGCGGGGGAACATTACCGGCAGCAGCTGAT
TGCCGCCAATCTGGATACTGCATTTATCGTTTGTGGATTGGATGGTGATTTTAATCCACGTCGGATTGAGCGTTACTGCG
TGTTGATTGCTAGTGGTGGTGTTGAGCCGGTGGTGGTGCTCACGAAGGTTGATCTGTGTGTTGATGTCGCGGCGGCGGTG
GCGGTGTTGCGTGAGCATTCTTCTCAGGCATTGGCCGTGGTGGCCGTTGATGCGCGCAAAGCGGAGCCTGTTGTGGCGCT
GTATCCGTGGTTATTACCGGGGCGTACGGTGGCGTTGCTCGGTTCATCGGGTGCGGGCAAGTCGACGTTGACGAACACGT
TGCTTGGCGAGCAGCGTATGAAGGTTGGTGAGGTGCGTCAAAGGGATTCGCGTGGCCGACATACGACTACGCATCGGGCC
TTATTGCCGTTGCCATCCGGGGCTTGTTTGATTGATACCCCAGGGATGCGTGAGCTTAAGTTCACCGGTGAAGAGGATCT
TGTCGAAGAGTTTGCTGACATTGAGTTGCTGGCGACGCAGTGCCGTTTTCGTGATTGTGCCCATCAGGCTGAGCCAGGGT
GTGCGGTGCGTGCGGCGATTGGGTGTGGGACGTTGGATCCGCAGCGTCTGCATCATTACTTTAAGTTGCGTGGTGAGATT
GTCGGGGCGGCAGACAGGTCGATGTTGCGGCGTTATTGA

Upstream 100 bases:

>100_bases
GGCAACAATCCGGTGATAGGCACGGCACAGCATTTTTCAAAAAGACAATCTGTGCCTATGTTGGAATGGGTGCATGATTG
AGCCTGTTGTTGGGTATCGG

Downstream 100 bases:

>100_bases
GTGTGGTTGCTCTCCTTGAGGTTCTTCGAATGCATCTGCATTGTCATGACCGTTGTCGCATTCCGTCGCTGTGCGTCTGC
TGTGTATCCTCGTGGAGTGT

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLQAIGWPWPGPPADSAWQAMCAMYSQCRPARVIEQHRSGYVVAEAPEVPIKVESLPAWQRRSFPPHERAVVGDWVLLDG
RRIVALLPRRTVIKRLAAGEHYRQQLIAANLDTAFIVCGLDGDFNPRRIERYCVLIASGGVEPVVVLTKVDLCVDVAAAV
AVLREHSSQALAVVAVDARKAEPVVALYPWLLPGRTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSRGRHTTTHRA
LLPLPSGACLIDTPGMRELKFTGEEDLVEEFADIELLATQCRFRDCAHQAEPGCAVRAAIGCGTLDPQRLHHYFKLRGEI
VGAADRSMLRRY

Sequences:

>Translated_332_residues
MLQAIGWPWPGPPADSAWQAMCAMYSQCRPARVIEQHRSGYVVAEAPEVPIKVESLPAWQRRSFPPHERAVVGDWVLLDG
RRIVALLPRRTVIKRLAAGEHYRQQLIAANLDTAFIVCGLDGDFNPRRIERYCVLIASGGVEPVVVLTKVDLCVDVAAAV
AVLREHSSQALAVVAVDARKAEPVVALYPWLLPGRTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSRGRHTTTHRA
LLPLPSGACLIDTPGMRELKFTGEEDLVEEFADIELLATQCRFRDCAHQAEPGCAVRAAIGCGTLDPQRLHHYFKLRGEI
VGAADRSMLRRY
>Mature_332_residues
MLQAIGWPWPGPPADSAWQAMCAMYSQCRPARVIEQHRSGYVVAEAPEVPIKVESLPAWQRRSFPPHERAVVGDWVLLDG
RRIVALLPRRTVIKRLAAGEHYRQQLIAANLDTAFIVCGLDGDFNPRRIERYCVLIASGGVEPVVVLTKVDLCVDVAAAV
AVLREHSSQALAVVAVDARKAEPVVALYPWLLPGRTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSRGRHTTTHRA
LLPLPSGACLIDTPGMRELKFTGEEDLVEEFADIELLATQCRFRDCAHQAEPGCAVRAAIGCGTLDPQRLHHYFKLRGEI
VGAADRSMLRRY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=218, Percent_Identity=31.651376146789, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 36520; Mature: 36520

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQAIGWPWPGPPADSAWQAMCAMYSQCRPARVIEQHRSGYVVAEAPEVPIKVESLPAWQ
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCEEECCCCCHH
RRSFPPHERAVVGDWVLLDGRRIVALLPRRTVIKRLAAGEHYRQQLIAANLDTAFIVCGL
HCCCCCCCCEEEEEEEEECCCEEEEECCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEC
DGDFNPRRIERYCVLIASGGVEPVVVLTKVDLCVDVAAAVAVLREHSSQALAVVAVDARK
CCCCCHHHEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
AEPVVALYPWLLPGRTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSRGRHTTTHRA
CCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
LLPLPSGACLIDTPGMRELKFTGEEDLVEEFADIELLATQCRFRDCAHQAEPGCAVRAAI
EEECCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
GCGTLDPQRLHHYFKLRGEIVGAADRSMLRRY
CCCCCCHHHHHHHHHHHHHEECHHHHHHHHCC
>Mature Secondary Structure
MLQAIGWPWPGPPADSAWQAMCAMYSQCRPARVIEQHRSGYVVAEAPEVPIKVESLPAWQ
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCEEECCCCCHH
RRSFPPHERAVVGDWVLLDGRRIVALLPRRTVIKRLAAGEHYRQQLIAANLDTAFIVCGL
HCCCCCCCCEEEEEEEEECCCEEEEECCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEC
DGDFNPRRIERYCVLIASGGVEPVVVLTKVDLCVDVAAAVAVLREHSSQALAVVAVDARK
CCCCCHHHEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
AEPVVALYPWLLPGRTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSRGRHTTTHRA
CCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
LLPLPSGACLIDTPGMRELKFTGEEDLVEEFADIELLATQCRFRDCAHQAEPGCAVRAAI
EEECCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
GCGTLDPQRLHHYFKLRGEIVGAADRSMLRRY
CCCCCCHHHHHHHHHHHHHEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]