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The map label for this gene is yraN [C]

Identifier: 182682195

GI number: 182682195

Start: 1850684

End: 1851049

Strand: Reverse

Name: yraN [C]

Synonym: XfasM23_1674

Alternate gene names: 182682195

Gene position: 1851049-1850684 (Counterclockwise)

Preceding gene: 182682196

Following gene: 182682194

Centisome position: 73.0

GC content: 55.19

Gene sequence:

>366_bases
ATGTTGAATCGGCGCGACTGCGGTGCGGCAGTTGAAGTTGCTGCGCGTCGGCATCTTGAACGGGCTGGTTTGCGTTGGTT
GGCGAGCAATGTGTGTTTCCGTGGCGGGGAGTTGGATTTGGTGATGTATGACGTGATGAGCGTTGTGTTTGTCGAGGTGC
GTTACCGTCAGCAAGAGAGTCATGGGAGTGCTGCGCAGAGTGTGGATCGGCGTAAACGCCGTAAGCTGGTCATGGCGGCG
CAATTGTTTTTACAGCGTCATCCGTTTTTAGCGCAGGTGCCGTGCCGCTTCGATGTGGTTGAGGGAGCAGGTAGGCCGTT
ACAGTTGCATTGGATCCGTGATGCGTTCCGTTTGGATGATTGTTGA

Upstream 100 bases:

>100_bases
AGGAACGTTACGTTTGGATGATTCCGGTAACGTGATACGTATTCCAATCTGGGCAACATTCAGAAATGGTCAGAGTATTC
CGGTGGAGATGCTCTGAGTC

Downstream 100 bases:

>100_bases
GATGCTGTGTGCTGTTGTGATGCAGCATTGATTTGCGCAGGTGTCGCATACGTTGCATGTGATGCGGTTTAAGGGATGAA
TGTGTAGAAGCAGTACGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLNRRDCGAAVEVAARRHLERAGLRWLASNVCFRGGELDLVMYDVMSVVFVEVRYRQQESHGSAAQSVDRRKRRKLVMAA
QLFLQRHPFLAQVPCRFDVVEGAGRPLQLHWIRDAFRLDDC

Sequences:

>Translated_121_residues
MLNRRDCGAAVEVAARRHLERAGLRWLASNVCFRGGELDLVMYDVMSVVFVEVRYRQQESHGSAAQSVDRRKRRKLVMAA
QLFLQRHPFLAQVPCRFDVVEGAGRPLQLHWIRDAFRLDDC
>Mature_121_residues
MLNRRDCGAAVEVAARRHLERAGLRWLASNVCFRGGELDLVMYDVMSVVFVEVRYRQQESHGSAAQSVDRRKRRKLVMAA
QLFLQRHPFLAQVPCRFDVVEGAGRPLQLHWIRDAFRLDDC

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=116, Percent_Identity=48.2758620689655, Blast_Score=100, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1586_XYLFT (Q87B72)

Other databases:

- EMBL:   AE009442
- RefSeq:   NP_779779.1
- ProteinModelPortal:   Q87B72
- STRING:   Q87B72
- GeneID:   1142928
- GenomeReviews:   AE009442_GR
- KEGG:   xft:PD1586
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QWLKNAF
- ProtClustDB:   PRK12497
- BioCyc:   XFAS183190:PD_1586-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13996; Mature: 13996

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRRDCGAAVEVAARRHLERAGLRWLASNVCFRGGELDLVMYDVMSVVFVEVRYRQQES
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
HGSAAQSVDRRKRRKLVMAAQLFLQRHPFLAQVPCRFDVVEGAGRPLQLHWIRDAFRLDD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCEEEEEHHHHHHCCC
C
C
>Mature Secondary Structure
MLNRRDCGAAVEVAARRHLERAGLRWLASNVCFRGGELDLVMYDVMSVVFVEVRYRQQES
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
HGSAAQSVDRRKRRKLVMAAQLFLQRHPFLAQVPCRFDVVEGAGRPLQLHWIRDAFRLDD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCEEEEEHHHHHHCCC
C
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12533478