| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is suhB [H]
Identifier: 182682101
GI number: 182682101
Start: 1751436
End: 1752263
Strand: Direct
Name: suhB [H]
Synonym: XfasM23_1579
Alternate gene names: 182682101
Gene position: 1751436-1752263 (Clockwise)
Preceding gene: 182682099
Following gene: 182682102
Centisome position: 69.07
GC content: 55.07
Gene sequence:
>828_bases ATGCAGAAACCCGCGGTTAACATCATGGTCAAAGCCGCTCGTTCCGCCGGCAACGTCCTATTGCGACACATCAATAAATT AGAAACGCTGCATGTCATCCAAAAAAGCCGTATGGACTATGCCAGCGACGTGGATGAGATGGCTGAAAAGGTCATTGTCA AGGAACTCAAGCGGGCCTATCCGGACTACGGCATCCTCGGCGAGGAAGGGGGACTGCAGGGCAATCATCGAATCATGTGG GTGATTGATCCACTGGACGGCACCAGTAACTATTTGCGTGGTTTCCCGCATTACTGCGTTTCAATCGCGTTGGTCGAAAA TGGTGAACCTACAGATGCCGTGATTTTCGATCCGCTGCGCAACGAGCTGTTCACTGCCAGCCGTGGTGCTGGTGCAGTCC TCAATGAACGCAAGATCCGCGTGGCGAACCGTAAAGATTTGAACGGTACGATGCTAAACACGGGTTTCTCACCACGGGAA CGCAGCCGTGCTCATGCGCAGTTGAAATGCGTGGATGCGTTGCTGATGCAGGCCGAAGATATCCGCCGTAGCGGTTCGGC CGCTCTGGACTTGGCCTACGTTGCTTGTGGCCGTGCAGATGCTTACTTCGAGGCTGGAATAAAGGTGTGGGATGTGGCTG CGGGAATGTTGTTAGTCCGCGAAGCCGGGGGTTACGTGTGCGACTTCAAGGGTGCTGATGCGCCCCGCATGGATGATAAA GGGCCGGAGAGCTGCCAGTTGATCGCAGGCAATATCAAAGTGGCCCACGCGCTGCAACAAGTCATTGTCAGCAGTGGTTA CGGGCGGGAGTTCGATCCGAAGCGCTGA
Upstream 100 bases:
>100_bases GTGTAGTGCTGCATGGTAAACTGCCCGACGGGCGACGCACTGGATTGTTCCTCCCCCTACTCAACCATCCACTCTTCTCA CGTGACGAGAGTCTCCAGGC
Downstream 100 bases:
>100_bases GTCGGTATGGTTCTCTTGGAACGTTTGTAAGGTTGGGATGAAAGATCGTATCGGTGACACAGTCCCTGTTGCGGGGGCAA CGTCCTACTGCAAGCTACAG
Product: inositol-phosphate phosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPDYGILGEEGGLQGNHRIMW VIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLRNELFTASRGAGAVLNERKIRVANRKDLNGTMLNTGFSPRE RSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK GPESCQLIAGNIKVAHALQQVIVSSGYGREFDPKR
Sequences:
>Translated_275_residues MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPDYGILGEEGGLQGNHRIMW VIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLRNELFTASRGAGAVLNERKIRVANRKDLNGTMLNTGFSPRE RSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK GPESCQLIAGNIKVAHALQQVIVSSGYGREFDPKR >Mature_275_residues MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPDYGILGEEGGLQGNHRIMW VIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLRNELFTASRGAGAVLNERKIRVANRKDLNGTMLNTGFSPRE RSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK GPESCQLIAGNIKVAHALQQVIVSSGYGREFDPKR
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=229, Percent_Identity=34.061135371179, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI221625487, Length=229, Percent_Identity=34.061135371179, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI7657236, Length=269, Percent_Identity=30.4832713754647, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI221625507, Length=141, Percent_Identity=31.9148936170213, Blast_Score=89, Evalue=5e-18, Organism=Escherichia coli, GI1788882, Length=257, Percent_Identity=44.7470817120623, Blast_Score=229, Evalue=1e-61, Organism=Escherichia coli, GI1790659, Length=228, Percent_Identity=27.6315789473684, Blast_Score=75, Evalue=6e-15, Organism=Caenorhabditis elegans, GI193202570, Length=246, Percent_Identity=28.4552845528455, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI193202572, Length=244, Percent_Identity=28.2786885245902, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320493, Length=202, Percent_Identity=36.1386138613861, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321836, Length=204, Percent_Identity=32.3529411764706, Blast_Score=117, Evalue=2e-27, Organism=Drosophila melanogaster, GI21357329, Length=228, Percent_Identity=35.0877192982456, Blast_Score=144, Evalue=7e-35, Organism=Drosophila melanogaster, GI24664926, Length=272, Percent_Identity=31.9852941176471, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI21357303, Length=232, Percent_Identity=31.8965517241379, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI24664922, Length=242, Percent_Identity=31.8181818181818, Blast_Score=127, Evalue=8e-30, Organism=Drosophila melanogaster, GI21357957, Length=228, Percent_Identity=30.7017543859649, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24664918, Length=192, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 30206; Mature: 30206
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHC PDYGILGEEGGLQGNHRIMWVIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLR CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCEEEEEEEECCCCCCEEEECHHH NELFTASRGAGAVLNERKIRVANRKDLNGTMLNTGFSPRERSRAHAQLKCVDALLMQAED HHHHHCCCCCCCEECCCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH IRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK HHHCCCHHEEHHHHHCCCCHHHHHCCCCHHHHHHHHHHEECCCCEEEECCCCCCCCCCCC GPESCQLIAGNIKVAHALQQVIVSSGYGREFDPKR CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHC PDYGILGEEGGLQGNHRIMWVIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLR CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCEEEEEEEECCCCCCEEEECHHH NELFTASRGAGAVLNERKIRVANRKDLNGTMLNTGFSPRERSRAHAQLKCVDALLMQAED HHHHHCCCCCCCEECCCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH IRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK HHHCCCHHEEHHHHHCCCCHHHHHCCCCHHHHHHHHHHEECCCCEEEECCCCCCCCCCCC GPESCQLIAGNIKVAHALQQVIVSSGYGREFDPKR CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]