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The map label for this gene is yjeK [H]

Identifier: 182682099

GI number: 182682099

Start: 1749408

End: 1750436

Strand: Direct

Name: yjeK [H]

Synonym: XfasM23_1577

Alternate gene names: 182682099

Gene position: 1749408-1750436 (Clockwise)

Preceding gene: 182682091

Following gene: 182682101

Centisome position: 68.99

GC content: 60.06

Gene sequence:

>1029_bases
ATGATAACCGCAGCCCCTGTTCCCTTACAGCCATCCACCGCCAGTCCATTGCAGCCGCCACGCTGGCAGCAGGTATGGCG
GGAGGCAATCCGCGATCCGCGCGAGCTACTTGCATTACTCAAGCTTGATCCGACATCGGTGGGGATGAGTGAGGCGGCGG
CGGCACAGTTCCCGCTGCGCGTGCCGCGGGGGTTCGTGACACGGATGCGGGTTGGTGATCTGCATGATCCGCTGTTACGT
CAGGTGTTGCCAATGGACGCGGAACAAGATCAGATCGCTGGCTTCGGTGTGGATGCGGTGGGCGATGGTGCAGCCAAACA
GGCAACGGGAATCATCCAGAAATATCAAGGGCGCATTCTGCTGATTGCTACTGGAAGTTGCGCGGTGCATTGCCGGTATT
GTTTCAGACGGCACTTTCCGTACGCTGAAGACACGGCTTCGCATGATCGCTGGCGGGAAGCGGCAGCGTTCGTCAGGGCT
GATCCATCGATTGAGGAAGTTATTTTGTCGGGGGGCGATCCGCTGTCGTTGTCTACCGCTAAGTTGGTGGAATTAACCGA
CGCGCTGCGCGGCACTCCCCATCTGAAACGCCTGCGCATCCACAGCCGATTGCCGGTGGTGCTCCCTGAGCGGATCGATA
CACCGCTGCTGGAGTGGCTCAGCGCACTTCCCTGGCCTGTGGCGTTTGTAATTCACGCCAATCACGCTAACGAGTTCGAC
GCCAGTGTCGATGCCGCTCTGGCGGCGCTGCGCGGTGTTGGAACCCAGTTGCTCAATCAAGCGGTGTTACTGCGCGGGGT
CAACGACAATATCAATGCGCTGGCCGCATTAAGTGAACGCAGCTTCGCTGCTGGGGTACTGCCGTACTATCTGCATCAGC
TCGACCGCATCGCGGGGACCGCCCACTATGAGGTGGAGGATGCGCGGGCACGGACGCTACACGCGGAGTTAGTTGCGCGG
CTATCCGGTTATCTGGTGCCACGCTTCGTGCGTGAGGTCCCTGGTGACAGCAGTAAACGTCCGCTGTAG

Upstream 100 bases:

>100_bases
TGAAGTTCCTCAATTAAACAAAAAAACCGCCGCGATAGGAGGGGGCAGCGGATACAATGAGGCAGCCCACCGAACATGGT
GGGTTTTTCCTCAACGCAGC

Downstream 100 bases:

>100_bases
CCATCTCGGGGAGCTTGAGGGGCGCGGCTCAACGAAGGTCATGCTGTCTGTGACGGTCTCTGTGGTGATCCATGCGCATC
ACGCTCACCAGATGAAAAAC

Product: lysine 2,3-aminomutase YodO family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MITAAPVPLQPSTASPLQPPRWQQVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVTRMRVGDLHDPLLR
QVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAEDTASHDRWREAAAFVRA
DPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFD
ASVDAALAALRGVGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVAR
LSGYLVPRFVREVPGDSSKRPL

Sequences:

>Translated_342_residues
MITAAPVPLQPSTASPLQPPRWQQVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVTRMRVGDLHDPLLR
QVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAEDTASHDRWREAAAFVRA
DPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFD
ASVDAALAALRGVGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVAR
LSGYLVPRFVREVPGDSSKRPL
>Mature_342_residues
MITAAPVPLQPSTASPLQPPRWQQVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVTRMRVGDLHDPLLR
QVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAEDTASHDRWREAAAFVRA
DPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFD
ASVDAALAALRGVGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVAR
LSGYLVPRFVREVPGDSSKRPL

Specific function: With YjeA might be involved in the post-translational modification of elongation factor P (EF-P) [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=322, Percent_Identity=47.2049689440994, Blast_Score=290, Evalue=7e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022462
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37554; Mature: 37554

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITAAPVPLQPSTASPLQPPRWQQVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHCCCC
VPRGFVTRMRVGDLHDPLLRQVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRIL
CCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEE
LIATGSCAVHCRYCFRRHFPYAEDTASHDRWREAAAFVRADPSIEEVILSGGDPLSLSTA
EEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHH
KLVELTDALRGTPHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFD
HHHHHHHHHCCCCHHHHHHHHCCCCEECCHHCCHHHHHHHHHCCCCEEEEEECCCCCCHH
ASVDAALAALRGVGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AHYEVEDARARTLHAELVARLSGYLVPRFVREVPGDSSKRPL
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MITAAPVPLQPSTASPLQPPRWQQVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHCCCC
VPRGFVTRMRVGDLHDPLLRQVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRIL
CCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEE
LIATGSCAVHCRYCFRRHFPYAEDTASHDRWREAAAFVRADPSIEEVILSGGDPLSLSTA
EEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHH
KLVELTDALRGTPHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFD
HHHHHHHHHCCCCHHHHHHHHCCCCEECCHHCCHHHHHHHHHCCCCEEEEEECCCCCCHH
ASVDAALAALRGVGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AHYEVEDARARTLHAELVARLSGYLVPRFVREVPGDSSKRPL
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]