Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is mtaD [H]
Identifier: 182682097
GI number: 182682097
Start: 1747258
End: 1748601
Strand: Reverse
Name: mtaD [H]
Synonym: XfasM23_1575
Alternate gene names: 182682097
Gene position: 1748601-1747258 (Counterclockwise)
Preceding gene: 182682098
Following gene: 182682096
Centisome position: 68.96
GC content: 58.04
Gene sequence:
>1344_bases ATGACCAATGAATCTCTCCCTGCTGAACCCTGCGATGTGCTGATCGAGGCTGGCTACGTTGTCCCCATCCAACCACATGG CATCGTGCTAGAACAACATGCCGTTGCGGTCCGTGAGAGTGTCATCGTTGGCCTACTTCCAATTGCCGAGGCCCGCCTGC GCTTTGCCCCCTCGCTCACGGTCAGCCGCCCTCAAGCCGCCTTATTACCCGGATTGGTCAACGCCCATACCCACAACCCC ATGACCCTACTACGTGGCATGGCCGATGACCTGCCACTCATGACATGGTTGCAACAACACATCTGGCCCGTGGAGACCGC CGTGATCGGCCCGGAATTTGTGGGCGACGGCACCGCACTGGCCATCGCCGAGATGCTGCGTGGTGGCACCACCTGCGCCA ACGAGAACTATTTTTTCCCTGATGTCCAAGCCGCCGTTTACAAACAGCACGGTTTCCGCGCCCTGGTCGGTGCGATCATC ATTGATTTTCCGACCGCCTGGGCCAACAGCGATGATGAGTACTTTGCCCGTGCCATTGAATTGCACGACCAATGGCGCGG CGATCCCTTAATCGGTACCGCCTTTGCGCCACATGCCCCCTATACAGTGAGCGATGCGAACTTCGAGCGCATCCGCGTCC TTGCCGATCAACTGGATGTTTTGGTGCATCTGCATACCCACGAAACCGCCCAGGAAATTGCTGACTCCATCAAACACCAT GGCCAGCGTCCGTTGGCGCGATTGGACCGGCTTGATTTGGTCAATGACCGCCTGATTGCGGTACATATGACGCAATTAAC AGAAGCCGAGATCCAATTGTGCGCCACACGTGGAGTTAGCGTAGTGCATTGCCCAGAATCCAACCTCAAACTGGCTTCCG GTTTTTGCCCCGCTTTCGCACTGCACCGCGCTGGTGTGAACCTCGCCATCGGTACCGATGGCTGTGCAAGCAACAACGAC CTAGACATGTTTAGTGAACATCGCATCGCAGCCATGCTGGCGAAAGCTGTGGCCAACGACCCTACCGCCTTGGACGCAGC GACCACCTTGCGTGCGGCGACCCTGGGCGGTGCCCGCGCACTCGGTTTCGGCCATCTGATCGGTTCCATTGAAATCGGCA AGCAAGCCGACCTGATCTGCGTGGACTTGAGCGCGCTCGAAACACAACCCTTGTACCACGTACTCTCGCAACTGGTTTAC GCTGCAGGGCGTCAGCACGTCACGGATGTGTGGATTGCCGGCCAGCCAAAATTGATCCAGCGTGAGCTCATCGGCATTGA TACCGCAGCACTGCTGACTAAAGCGCGTCAGTGGCGCGAGCGCATCCGCGCCATCCGTATTTGA
Upstream 100 bases:
>100_bases TTGAGAACCCGATGCCAGCCAACATAGCAACCACACTGGCTGGCCTTTGCTTTACAGACAGGGCCAGATCCTCCTACATC ACCTTCTGGCCCCACTTGTC
Downstream 100 bases:
>100_bases ATCCTGCGCACCGCTTCAAGGAGATTCGCCATGCCCTCCTCATATGACCGTGTTTCCAAGAATTACCGCCAAAGTGAACT GGATAAATTCGCATCCTTCA
Product: N-ethylammeline chlorohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MTNESLPAEPCDVLIEAGYVVPIQPHGIVLEQHAVAVRESVIVGLLPIAEARLRFAPSLTVSRPQAALLPGLVNAHTHNP MTLLRGMADDLPLMTWLQQHIWPVETAVIGPEFVGDGTALAIAEMLRGGTTCANENYFFPDVQAAVYKQHGFRALVGAII IDFPTAWANSDDEYFARAIELHDQWRGDPLIGTAFAPHAPYTVSDANFERIRVLADQLDVLVHLHTHETAQEIADSIKHH GQRPLARLDRLDLVNDRLIAVHMTQLTEAEIQLCATRGVSVVHCPESNLKLASGFCPAFALHRAGVNLAIGTDGCASNND LDMFSEHRIAAMLAKAVANDPTALDAATTLRAATLGGARALGFGHLIGSIEIGKQADLICVDLSALETQPLYHVLSQLVY AAGRQHVTDVWIAGQPKLIQRELIGIDTAALLTKARQWRERIRAIRI
Sequences:
>Translated_447_residues MTNESLPAEPCDVLIEAGYVVPIQPHGIVLEQHAVAVRESVIVGLLPIAEARLRFAPSLTVSRPQAALLPGLVNAHTHNP MTLLRGMADDLPLMTWLQQHIWPVETAVIGPEFVGDGTALAIAEMLRGGTTCANENYFFPDVQAAVYKQHGFRALVGAII IDFPTAWANSDDEYFARAIELHDQWRGDPLIGTAFAPHAPYTVSDANFERIRVLADQLDVLVHLHTHETAQEIADSIKHH GQRPLARLDRLDLVNDRLIAVHMTQLTEAEIQLCATRGVSVVHCPESNLKLASGFCPAFALHRAGVNLAIGTDGCASNND LDMFSEHRIAAMLAKAVANDPTALDAATTLRAATLGGARALGFGHLIGSIEIGKQADLICVDLSALETQPLYHVLSQLVY AAGRQHVTDVWIAGQPKLIQRELIGIDTAALLTKARQWRERIRAIRI >Mature_446_residues TNESLPAEPCDVLIEAGYVVPIQPHGIVLEQHAVAVRESVIVGLLPIAEARLRFAPSLTVSRPQAALLPGLVNAHTHNPM TLLRGMADDLPLMTWLQQHIWPVETAVIGPEFVGDGTALAIAEMLRGGTTCANENYFFPDVQAAVYKQHGFRALVGAIII DFPTAWANSDDEYFARAIELHDQWRGDPLIGTAFAPHAPYTVSDANFERIRVLADQLDVLVHLHTHETAQEIADSIKHHG QRPLARLDRLDLVNDRLIAVHMTQLTEAEIQLCATRGVSVVHCPESNLKLASGFCPAFALHRAGVNLAIGTDGCASNNDL DMFSEHRIAAMLAKAVANDPTALDAATTLRAATLGGARALGFGHLIGSIEIGKQADLICVDLSALETQPLYHVLSQLVYA AGRQHVTDVWIAGQPKLIQRELIGIDTAALLTKARQWRERIRAIRI
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=443, Percent_Identity=23.4762979683973, Blast_Score=123, Evalue=4e-28, Organism=Escherichia coli, GI1789249, Length=333, Percent_Identity=26.4264264264264, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI87082177, Length=445, Percent_Identity=24.7191011235955, Blast_Score=90, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17540282, Length=381, Percent_Identity=24.1469816272966, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319963, Length=339, Percent_Identity=24.4837758112094, Blast_Score=100, Evalue=3e-22, Organism=Drosophila melanogaster, GI24643849, Length=382, Percent_Identity=26.4397905759162, Blast_Score=132, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 48622; Mature: 48491
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNESLPAEPCDVLIEAGYVVPIQPHGIVLEQHAVAVRESVIVGLLPIAEARLRFAPSLT CCCCCCCCCHHHHHEECCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VSRPQAALLPGLVNAHTHNPMTLLRGMADDLPLMTWLQQHIWPVETAVIGPEFVGDGTAL CCCCHHHHCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHEEECCHHCCCCHHH AIAEMLRGGTTCANENYFFPDVQAAVYKQHGFRALVGAIIIDFPTAWANSDDEYFARAIE HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH LHDQWRGDPLIGTAFAPHAPYTVSDANFERIRVLADQLDVLVHLHTHETAQEIADSIKHH HHHHCCCCCCEECCCCCCCCEEECCCCHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHC GQRPLARLDRLDLVNDRLIAVHMTQLTEAEIQLCATRGVSVVHCPESNLKLASGFCPAFA CCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCHHHH LHRAGVNLAIGTDGCASNNDLDMFSEHRIAAMLAKAVANDPTALDAATTLRAATLGGARA HHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHH LGFGHLIGSIEIGKQADLICVDLSALETQPLYHVLSQLVYAAGRQHVTDVWIAGQPKLIQ HHHHHHHCCEEECCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH RELIGIDTAALLTKARQWRERIRAIRI HHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNESLPAEPCDVLIEAGYVVPIQPHGIVLEQHAVAVRESVIVGLLPIAEARLRFAPSLT CCCCCCCCHHHHHEECCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VSRPQAALLPGLVNAHTHNPMTLLRGMADDLPLMTWLQQHIWPVETAVIGPEFVGDGTAL CCCCHHHHCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHEEECCHHCCCCHHH AIAEMLRGGTTCANENYFFPDVQAAVYKQHGFRALVGAIIIDFPTAWANSDDEYFARAIE HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH LHDQWRGDPLIGTAFAPHAPYTVSDANFERIRVLADQLDVLVHLHTHETAQEIADSIKHH HHHHCCCCCCEECCCCCCCCEEECCCCHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHC GQRPLARLDRLDLVNDRLIAVHMTQLTEAEIQLCATRGVSVVHCPESNLKLASGFCPAFA CCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCHHHH LHRAGVNLAIGTDGCASNNDLDMFSEHRIAAMLAKAVANDPTALDAATTLRAATLGGARA HHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHH LGFGHLIGSIEIGKQADLICVDLSALETQPLYHVLSQLVYAAGRQHVTDVWIAGQPKLIQ HHHHHHHCCEEECCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH RELIGIDTAALLTKARQWRERIRAIRI HHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA