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The map label for this gene is ycjN [C]

Identifier: 182682072

GI number: 182682072

Start: 1723555

End: 1724847

Strand: Reverse

Name: ycjN [C]

Synonym: XfasM23_1550

Alternate gene names: 182682072

Gene position: 1724847-1723555 (Counterclockwise)

Preceding gene: 182682073

Following gene: 182682071

Centisome position: 68.02

GC content: 53.13

Gene sequence:

>1293_bases
GTGTATTCCGGTAAATGTCTTGTTTGGTTGTTGGCTGGTTTGGTGATGGTGGCTTGTGGTCATGAGTCATCCAGGCACAC
GGTGCGATTTTGGGCAATGGGCCGTGAGGCTGAGGTGGTCGCTGCATTGGTTCGTGACTTCGAGAAGGAGTATCCGGGGA
TCCATGTGGAGCTTCAGAACATTCCGATGAGTGCTGCTCATGAGAAGTTGTTGACAGCGTTTGCTGCGGATCGACTTCCT
GACGTGTGCCAATTAGGGAATACCTGGCTTCCGGAATTTGCGTTGTTGGATGCGCTCGAGCCGCTACAGCCGTATGTGTC
CACGTCCAAGGTAGTGATGTCTGCGGATTACTTCCCTGGTGTTTGGGAGACCAACGTCGTTGCTGGGAGGCTTTATGGTG
TGCCGTGGTATGTGGACACACGTTTGCTGTTCTATCGCAAGGATATTTTGGAGGCCGCTGGGTACCGTACGCCTTTAACG
ACGTGGGCCGATTGGGAACGTGCGATGGCCGCGATCAAGCGCTACGTTGGAGCAGATCGTTATGCCATCTTAATGCCGCT
CAATGAGTTTGAGCAGCAGCTTTCGTTGGCGTTGCAGCAGGATGATCCGCTGCTACGTGATAACGATAATTACGGCAATT
TCCGCAGTCCTGGATTCCGTAGGGCGCTGCATTTTTATCGCACCATTTATGAGCAAGAGTGGGCACCTAAGGTGTCCGAA
ACCCAGGTGTCTAATGTCTGGTATGAGTTCTTTAACGGAAATTATGCGTTTTATTTTTCAGGGCCGTGGAATGTGCGTGA
GTTTAAGTTGCGTCAGCCACCGAATATGAGTGGTCAATGGGGCACGATGGCGCTACCTGGTCCGAATGGGCTTGGTGCTG
GTATTGCTGGTGGCTCTAGTTTGGTGATTTTTAAATCTTCGCAGAGTAAACAGGCGGCTTGGCGATTGGTGGAATATCTG
TCTCGACCGCAGGTGCAGGCTCGCTTCCACAGTATCATTGGGGATTTGCCGCCGCGGCGTAGTACTTGGCATTTTCCTGG
TTTGGCTGAAGATCCGTTGGCGCGTGCTTTTGCAGAGCAGTTGGAGCGGGTCAAAGCCACACCCAAGGTGCTTGAGTGGG
AGCGGATCGTGCAGGAGATGCGGTTGATCACTGAGCAGGTGGTGCGTGGAGGTTTATCGGAGCAGCAGGCGGTAGAGCAA
CTTGATCAGCGGGTCGATAAGATTCTTGCTAAGCGTCGTTGGATCCAGCAACAGGTCGGTAAGGGGCCGCATGCTGAGGG
AGTGCATCCATGA

Upstream 100 bases:

>100_bases
TGCGGCGGCGGTACGTTCGTTAGGGATTGCAGAGTCACATGCTCCGCCTGCGCAGACGCAGCGGGTCCCATCTTCTTTAG
GTAAGAAACCGGAGTAGTGA

Downstream 100 bases:

>100_bases
GGCGGGCTTCTTTGGTGGGTTGGGTGTTTGCTGGTCCTGCGGTGTTGGTTATCGGGATGTTCTTCGGTGTGCCGGTGTTG
ATGGCGTTGGCGCTCAGTTT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MYSGKCLVWLLAGLVMVACGHESSRHTVRFWAMGREAEVVAALVRDFEKEYPGIHVELQNIPMSAAHEKLLTAFAADRLP
DVCQLGNTWLPEFALLDALEPLQPYVSTSKVVMSADYFPGVWETNVVAGRLYGVPWYVDTRLLFYRKDILEAAGYRTPLT
TWADWERAMAAIKRYVGADRYAILMPLNEFEQQLSLALQQDDPLLRDNDNYGNFRSPGFRRALHFYRTIYEQEWAPKVSE
TQVSNVWYEFFNGNYAFYFSGPWNVREFKLRQPPNMSGQWGTMALPGPNGLGAGIAGGSSLVIFKSSQSKQAAWRLVEYL
SRPQVQARFHSIIGDLPPRRSTWHFPGLAEDPLARAFAEQLERVKATPKVLEWERIVQEMRLITEQVVRGGLSEQQAVEQ
LDQRVDKILAKRRWIQQQVGKGPHAEGVHP

Sequences:

>Translated_430_residues
MYSGKCLVWLLAGLVMVACGHESSRHTVRFWAMGREAEVVAALVRDFEKEYPGIHVELQNIPMSAAHEKLLTAFAADRLP
DVCQLGNTWLPEFALLDALEPLQPYVSTSKVVMSADYFPGVWETNVVAGRLYGVPWYVDTRLLFYRKDILEAAGYRTPLT
TWADWERAMAAIKRYVGADRYAILMPLNEFEQQLSLALQQDDPLLRDNDNYGNFRSPGFRRALHFYRTIYEQEWAPKVSE
TQVSNVWYEFFNGNYAFYFSGPWNVREFKLRQPPNMSGQWGTMALPGPNGLGAGIAGGSSLVIFKSSQSKQAAWRLVEYL
SRPQVQARFHSIIGDLPPRRSTWHFPGLAEDPLARAFAEQLERVKATPKVLEWERIVQEMRLITEQVVRGGLSEQQAVEQ
LDQRVDKILAKRRWIQQQVGKGPHAEGVHP
>Mature_430_residues
MYSGKCLVWLLAGLVMVACGHESSRHTVRFWAMGREAEVVAALVRDFEKEYPGIHVELQNIPMSAAHEKLLTAFAADRLP
DVCQLGNTWLPEFALLDALEPLQPYVSTSKVVMSADYFPGVWETNVVAGRLYGVPWYVDTRLLFYRKDILEAAGYRTPLT
TWADWERAMAAIKRYVGADRYAILMPLNEFEQQLSLALQQDDPLLRDNDNYGNFRSPGFRRALHFYRTIYEQEWAPKVSE
TQVSNVWYEFFNGNYAFYFSGPWNVREFKLRQPPNMSGQWGTMALPGPNGLGAGIAGGSSLVIFKSSQSKQAAWRLVEYL
SRPQVQARFHSIIGDLPPRRSTWHFPGLAEDPLARAFAEQLERVKATPKVLEWERIVQEMRLITEQVVRGGLSEQQAVEQ
LDQRVDKILAKRRWIQQQVGKGPHAEGVHP

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 49079; Mature: 49079

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSGKCLVWLLAGLVMVACGHESSRHTVRFWAMGREAEVVAALVRDFEKEYPGIHVELQN
CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEC
IPMSAAHEKLLTAFAADRLPDVCQLGNTWLPEFALLDALEPLQPYVSTSKVVMSADYFPG
CCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCC
VWETNVVAGRLYGVPWYVDTRLLFYRKDILEAAGYRTPLTTWADWERAMAAIKRYVGADR
CCCCCHHHHHEECCCEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
YAILMPLNEFEQQLSLALQQDDPLLRDNDNYGNFRSPGFRRALHFYRTIYEQEWAPKVSE
EEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
TQVSNVWYEFFNGNYAFYFSGPWNVREFKLRQPPNMSGQWGTMALPGPNGLGAGIAGGSS
HHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCE
LVIFKSSQSKQAAWRLVEYLSRPQVQARFHSIIGDLPPRRSTWHFPGLAEDPLARAFAEQ
EEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
LERVKATPKVLEWERIVQEMRLITEQVVRGGLSEQQAVEQLDQRVDKILAKRRWIQQQVG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
KGPHAEGVHP
CCCCCCCCCC
>Mature Secondary Structure
MYSGKCLVWLLAGLVMVACGHESSRHTVRFWAMGREAEVVAALVRDFEKEYPGIHVELQN
CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEC
IPMSAAHEKLLTAFAADRLPDVCQLGNTWLPEFALLDALEPLQPYVSTSKVVMSADYFPG
CCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCC
VWETNVVAGRLYGVPWYVDTRLLFYRKDILEAAGYRTPLTTWADWERAMAAIKRYVGADR
CCCCCHHHHHEECCCEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
YAILMPLNEFEQQLSLALQQDDPLLRDNDNYGNFRSPGFRRALHFYRTIYEQEWAPKVSE
EEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
TQVSNVWYEFFNGNYAFYFSGPWNVREFKLRQPPNMSGQWGTMALPGPNGLGAGIAGGSS
HHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCE
LVIFKSSQSKQAAWRLVEYLSRPQVQARFHSIIGDLPPRRSTWHFPGLAEDPLARAFAEQ
EEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
LERVKATPKVLEWERIVQEMRLITEQVVRGGLSEQQAVEQLDQRVDKILAKRRWIQQQVG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
KGPHAEGVHP
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA