Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682073
Identifier: 182682073
GI number: 182682073
Start: 1724851
End: 1726533
Strand: Reverse
Name: 182682073
Synonym: XfasM23_1551
Alternate gene names: NA
Gene position: 1726533-1724851 (Counterclockwise)
Preceding gene: 182682074
Following gene: 182682072
Centisome position: 68.09
GC content: 49.44
Gene sequence:
>1683_bases ATGTTGGTTCCGCTCCAAATTGGGGTGGTTGCTAAGGCTGTGTTTTTTTATGTGATATGTAGGCGTTGCATATTGGTGGA TTCGATGAGTCTGCGATTTTCATCACATTGGCTTTTTTCCTTGTCAGTTGTTGCGTTGTTATTGGTAGGCTGCAAACAGG ACTCCCCATCGGCTAAGCGGCAGATCATCATGGTTGAAGCTAAATTGCCGCCGCGTCCGCTCAAACCTGATCTGCCTCCG TTGTTTTTGGATATTGAGCGGCGTACGTTTCAGTTTTTTTGGGACACGACGAATGAGATGAATGGCTTGACTCCGGATCG TTATCCGTCAAGGCCGTTTGCAAGTATTGCTTCTGTCGGGTTTGCGCTGACCGCATATCCTATCGGGATAGAAAACGGTT GGATCAGTCGTAATCAAGCGATTGATCGTACTTTGACGACGTTGAAATTCTTGCGCGATGCTCCAATGGGGCCGCAGCGT ACCGGTTGCGCTGGCTACAAGGGTTTTTTCTACCACTTCTTGGATATGCAGCATGGGCATCGCTACGACAGTTGGGTGGA GTTGTCGAGTGTGGATACTGCATTGCTGATGATGGGGGTGTTGTTCGTCGAGTCTTATTACGATGGTGAGGATGTCCGTG AGAAGGAAATCCGTCAGATTGCTGACAAGCTATACAGGCGGGTTGATTGGTTGTATTTGCAACAGCGCAAACCGCTGATT TCGATGGGTTGGTATCCTGAGCGTGGCTTCATTGAGCATGACTGGATGGGCTACAACGAAGCGATGATGGTCTATTTGCT CGCACTCGGTTCGCCAACTCATCCGTTGGAATCGGTCTCCTGGGATGAATGGACACGCACTTATAACAAGGATTGGGGGG TGTTTCAGGGGCAGGAGTATCTGGCTTTCGGGCCGTTGTTTGGCCATCAGTACACGCATGTCTGGGTGGATTTTCGAGAT ATTCAAGACCAATACATGCGTGAGCGCGGTATTGATTATTTTCTTAATAGTCGTCGTGCGGTGCTTGCTCACCGGGATTA TGCAATTGATAACCCGATGAAGTGGAAGGATTACAGTGAGAACGTTTGGGGATTGACTGCCAGCGATGGGCCGCAAAACA CGACGCAGGAATATCGCGGTGAGCAGCGTCAGTTTTTCCACTATCGCAGCCGTGGTGCTGGGCTGTTTGAGTTCTTTGAT GACGGTACGATTGCACCAACTGCGATGGTGGCTTCGATCGTGTTCGCTCCGGAAGTGGTGATCCCAGCGACGCTTGAGAT GCATAAGCGTTACGGTGACTTTTTATATTCCAGTTATGGTTTTCTGGATGCGTTTAATCCGAGTTTCGATTATAAAGTTC CGCTTAAAACAGGTCGTTTGATCCCTGGCCGTGGTTGGGTGGCCAGTGATTATATCGGTATCGACCAAGGGATCATTCTT AGCATGATTGCTAATTATCGTAATGATTTCGTCTGGAATGTGATGAAGAAGAATAAATATGTCCGTATTGGTTTGGAGCG TGCTGGTTTTACTGGTGGCTGGCTCCAAGAGGATGAGGTGTTGCGTGGGTCGCAAAAGGATGAGCGTGCGGCGGCGGTAC GTTCGTTAGGGATTGCAGAGTCACATGCTCCGCCTGCGCAGACGCAGCGGGTCCCATCTTCTTTAGGTAAGAAACCGGAG TAG
Upstream 100 bases:
>100_bases GGAGGGGGGGCTATCCAAAGTGTCAGCATCCGCTTGTAGGTTCGTATTACAAGACACTTTCAAGTTGTTGTTTGAGTTCG GTGTGGGGGAGTGATTGGGT
Downstream 100 bases:
>100_bases TGAGTGTATTCCGGTAAATGTCTTGTTTGGTTGTTGGCTGGTTTGGTGATGGTGGCTTGTGGTCATGAGTCATCCAGGCA CACGGTGCGATTTTGGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MLVPLQIGVVAKAVFFYVICRRCILVDSMSLRFSSHWLFSLSVVALLLVGCKQDSPSAKRQIIMVEAKLPPRPLKPDLPP LFLDIERRTFQFFWDTTNEMNGLTPDRYPSRPFASIASVGFALTAYPIGIENGWISRNQAIDRTLTTLKFLRDAPMGPQR TGCAGYKGFFYHFLDMQHGHRYDSWVELSSVDTALLMMGVLFVESYYDGEDVREKEIRQIADKLYRRVDWLYLQQRKPLI SMGWYPERGFIEHDWMGYNEAMMVYLLALGSPTHPLESVSWDEWTRTYNKDWGVFQGQEYLAFGPLFGHQYTHVWVDFRD IQDQYMRERGIDYFLNSRRAVLAHRDYAIDNPMKWKDYSENVWGLTASDGPQNTTQEYRGEQRQFFHYRSRGAGLFEFFD DGTIAPTAMVASIVFAPEVVIPATLEMHKRYGDFLYSSYGFLDAFNPSFDYKVPLKTGRLIPGRGWVASDYIGIDQGIIL SMIANYRNDFVWNVMKKNKYVRIGLERAGFTGGWLQEDEVLRGSQKDERAAAVRSLGIAESHAPPAQTQRVPSSLGKKPE
Sequences:
>Translated_560_residues MLVPLQIGVVAKAVFFYVICRRCILVDSMSLRFSSHWLFSLSVVALLLVGCKQDSPSAKRQIIMVEAKLPPRPLKPDLPP LFLDIERRTFQFFWDTTNEMNGLTPDRYPSRPFASIASVGFALTAYPIGIENGWISRNQAIDRTLTTLKFLRDAPMGPQR TGCAGYKGFFYHFLDMQHGHRYDSWVELSSVDTALLMMGVLFVESYYDGEDVREKEIRQIADKLYRRVDWLYLQQRKPLI SMGWYPERGFIEHDWMGYNEAMMVYLLALGSPTHPLESVSWDEWTRTYNKDWGVFQGQEYLAFGPLFGHQYTHVWVDFRD IQDQYMRERGIDYFLNSRRAVLAHRDYAIDNPMKWKDYSENVWGLTASDGPQNTTQEYRGEQRQFFHYRSRGAGLFEFFD DGTIAPTAMVASIVFAPEVVIPATLEMHKRYGDFLYSSYGFLDAFNPSFDYKVPLKTGRLIPGRGWVASDYIGIDQGIIL SMIANYRNDFVWNVMKKNKYVRIGLERAGFTGGWLQEDEVLRGSQKDERAAAVRSLGIAESHAPPAQTQRVPSSLGKKPE >Mature_560_residues MLVPLQIGVVAKAVFFYVICRRCILVDSMSLRFSSHWLFSLSVVALLLVGCKQDSPSAKRQIIMVEAKLPPRPLKPDLPP LFLDIERRTFQFFWDTTNEMNGLTPDRYPSRPFASIASVGFALTAYPIGIENGWISRNQAIDRTLTTLKFLRDAPMGPQR TGCAGYKGFFYHFLDMQHGHRYDSWVELSSVDTALLMMGVLFVESYYDGEDVREKEIRQIADKLYRRVDWLYLQQRKPLI SMGWYPERGFIEHDWMGYNEAMMVYLLALGSPTHPLESVSWDEWTRTYNKDWGVFQGQEYLAFGPLFGHQYTHVWVDFRD IQDQYMRERGIDYFLNSRRAVLAHRDYAIDNPMKWKDYSENVWGLTASDGPQNTTQEYRGEQRQFFHYRSRGAGLFEFFD DGTIAPTAMVASIVFAPEVVIPATLEMHKRYGDFLYSSYGFLDAFNPSFDYKVPLKTGRLIPGRGWVASDYIGIDQGIIL SMIANYRNDFVWNVMKKNKYVRIGLERAGFTGGWLQEDEVLRGSQKDERAAAVRSLGIAESHAPPAQTQRVPSSLGKKPE
Specific function: Unknown
COG id: COG5368
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64580; Mature: 64580
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVPLQIGVVAKAVFFYVICRRCILVDSMSLRFSSHWLFSLSVVALLLVGCKQDSPSAKR CEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCE QIIMVEAKLPPRPLKPDLPPLFLDIERRTFQFFWDTTNEMNGLTPDRYPSRPFASIASVG EEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH FALTAYPIGIENGWISRNQAIDRTLTTLKFLRDAPMGPQRTGCAGYKGFFYHFLDMQHGH HEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC RYDSWVELSSVDTALLMMGVLFVESYYDGEDVREKEIRQIADKLYRRVDWLYLQQRKPLI CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE SMGWYPERGFIEHDWMGYNEAMMVYLLALGSPTHPLESVSWDEWTRTYNKDWGVFQGQEY EECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCE LAFGPLFGHQYTHVWVDFRDIQDQYMRERGIDYFLNSRRAVLAHRDYAIDNPMKWKDYSE EEECCCCCCCEEEEEEEHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCC NVWGLTASDGPQNTTQEYRGEQRQFFHYRSRGAGLFEFFDDGTIAPTAMVASIVFAPEVV CEEEEECCCCCCCCHHHHCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEE IPATLEMHKRYGDFLYSSYGFLDAFNPSFDYKVPLKTGRLIPGRGWVASDYIGIDQGIIL ECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCCHHHH SMIANYRNDFVWNVMKKNKYVRIGLERAGFTGGWLQEDEVLRGSQKDERAAAVRSLGIAE HHHHHHHHHHEEEHHHCCCEEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCC SHAPPAQTQRVPSSLGKKPE CCCCCHHHHHCHHHHCCCCC >Mature Secondary Structure MLVPLQIGVVAKAVFFYVICRRCILVDSMSLRFSSHWLFSLSVVALLLVGCKQDSPSAKR CEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCE QIIMVEAKLPPRPLKPDLPPLFLDIERRTFQFFWDTTNEMNGLTPDRYPSRPFASIASVG EEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH FALTAYPIGIENGWISRNQAIDRTLTTLKFLRDAPMGPQRTGCAGYKGFFYHFLDMQHGH HEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC RYDSWVELSSVDTALLMMGVLFVESYYDGEDVREKEIRQIADKLYRRVDWLYLQQRKPLI CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE SMGWYPERGFIEHDWMGYNEAMMVYLLALGSPTHPLESVSWDEWTRTYNKDWGVFQGQEY EECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCE LAFGPLFGHQYTHVWVDFRDIQDQYMRERGIDYFLNSRRAVLAHRDYAIDNPMKWKDYSE EEECCCCCCCEEEEEEEHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCC NVWGLTASDGPQNTTQEYRGEQRQFFHYRSRGAGLFEFFDDGTIAPTAMVASIVFAPEVV CEEEEECCCCCCCCHHHHCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEE IPATLEMHKRYGDFLYSSYGFLDAFNPSFDYKVPLKTGRLIPGRGWVASDYIGIDQGIIL ECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCCHHHH SMIANYRNDFVWNVMKKNKYVRIGLERAGFTGGWLQEDEVLRGSQKDERAAAVRSLGIAE HHHHHHHHHHEEEHHHCCCEEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCC SHAPPAQTQRVPSSLGKKPE CCCCCHHHHHCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA