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The map label for this gene is 182682068

Identifier: 182682068

GI number: 182682068

Start: 1717307

End: 1718524

Strand: Direct

Name: 182682068

Synonym: XfasM23_1546

Alternate gene names: NA

Gene position: 1717307-1718524 (Clockwise)

Preceding gene: 182682067

Following gene: 182682076

Centisome position: 67.73

GC content: 54.84

Gene sequence:

>1218_bases
ATGATTCCTTCTGTTTCCCCACAACAAGACGCCCTCACCGGACAACCGCTACGTGTAGTTGAACGCGATGGCGTGCACTA
CACCCTCCTCGGTACTGCTCACATCTCCCAAGCCAGCGTGGCTGCGGTCAAACAGGAAGTTGAAAGTGGCTGCTACGACG
CCATCGCTGTCGAACTGGACGCACAGCGCCTGCAAGCACTATGCGATCCGGATACGTTAGCTAAGCTCGACCTGATACAA
GTGATCCGTAAAGGACAATTGGCATTATTTGCAGCCAACCTGGCTCTAGCGGCATACCAGCGCCGCCTAGCCAAGCAACT
AGGCATCGAACCTGGTGCCGAACTGAAGACCGCGGTGACCATGGCACGCGAACGCGATCTCCCCGTCCATCTGATCGACC
GCGAAGTCGGCCTTACTTTTAAACGTGCCTCGGCCAAACTTGGCTTCCTCGGAAAAATGAAGTTGGGCGGTGGACTGATT
GCCGGACTGTTCGCCGCCGATGAGGTCGGAGAAGAAGAAATTGAAAAACTCAAGCAAGGCGACATGCTCGAAGCTAGCTT
TGGCGACTTTGCCAACGAAAGCCCGGAGCTATACCAAACCATCATCGCCGAGCGCGACCGCTACATGGCCACCCGCCTAC
GCGAAGAAGTAAACAGCGCAACACCCAAAGTACTGGTGGTTGTCGGTGCAGGTCATTTAACTGGATTGGCCAAACACCTT
GAGAACGACACAGAGCCACCTACCGAACTGCGCGCCCTACTGGAAAAAGTACAACAGAAAAAACGCGTCCCCTGGTTCAC
ACTGGGACTAATGGCACTCATCGCCACTGGTATTGTCCACGGATTCTTGCGTGGTGGCTTCGCAATGGGCACGGATCTAT
TACTACAATGGGCGCTATACACTAGTACCCTAGCCGCACTCGGCTGCGCATTAGCAGGCAGCCATCCATTAAGTGTGCTG
GTGGCATTACTGGTCGCACCATTCAAACCGTTCCGGGTAACCCTACCGACTGGTGCCTTCGCCGCACTGGTCGAAGTGCA
TATGCGCAAACCAGCCTACCAAGACTTCCTCACCCTACGCGACGACGCGCAAACCCTCTACGGCTGGTATAAAAACCGAG
TCTCAAGAGTGATGCTGACCTTCGCATTCACCAACCTAGGCAGCATGCTCGGCGTCTGGATTGCCGTTGTAAGCATCTAC
AATCGCCTACACAGCTAA

Upstream 100 bases:

>100_bases
AGGCACGCATGAATGAGAAGCCAATGATCACACCTGCCCACCACCAGACAGCACATCCGTCTAGTGTGGCTCACCTTCCC
TCTTCCGGACGAATCCTTCG

Downstream 100 bases:

>100_bases
CCCACCATCAAAAAACCCCAACGGGCCTCCCATACAAACGGATCACTGCACCACATAACGATACCCATCATTGAGTGGTG
CATCATCCATTGCCGCAATG

Product: TraB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MIPSVSPQQDALTGQPLRVVERDGVHYTLLGTAHISQASVAAVKQEVESGCYDAIAVELDAQRLQALCDPDTLAKLDLIQ
VIRKGQLALFAANLALAAYQRRLAKQLGIEPGAELKTAVTMARERDLPVHLIDREVGLTFKRASAKLGFLGKMKLGGGLI
AGLFAADEVGEEEIEKLKQGDMLEASFGDFANESPELYQTIIAERDRYMATRLREEVNSATPKVLVVVGAGHLTGLAKHL
ENDTEPPTELRALLEKVQQKKRVPWFTLGLMALIATGIVHGFLRGGFAMGTDLLLQWALYTSTLAALGCALAGSHPLSVL
VALLVAPFKPFRVTLPTGAFAALVEVHMRKPAYQDFLTLRDDAQTLYGWYKNRVSRVMLTFAFTNLGSMLGVWIAVVSIY
NRLHS

Sequences:

>Translated_405_residues
MIPSVSPQQDALTGQPLRVVERDGVHYTLLGTAHISQASVAAVKQEVESGCYDAIAVELDAQRLQALCDPDTLAKLDLIQ
VIRKGQLALFAANLALAAYQRRLAKQLGIEPGAELKTAVTMARERDLPVHLIDREVGLTFKRASAKLGFLGKMKLGGGLI
AGLFAADEVGEEEIEKLKQGDMLEASFGDFANESPELYQTIIAERDRYMATRLREEVNSATPKVLVVVGAGHLTGLAKHL
ENDTEPPTELRALLEKVQQKKRVPWFTLGLMALIATGIVHGFLRGGFAMGTDLLLQWALYTSTLAALGCALAGSHPLSVL
VALLVAPFKPFRVTLPTGAFAALVEVHMRKPAYQDFLTLRDDAQTLYGWYKNRVSRVMLTFAFTNLGSMLGVWIAVVSIY
NRLHS
>Mature_405_residues
MIPSVSPQQDALTGQPLRVVERDGVHYTLLGTAHISQASVAAVKQEVESGCYDAIAVELDAQRLQALCDPDTLAKLDLIQ
VIRKGQLALFAANLALAAYQRRLAKQLGIEPGAELKTAVTMARERDLPVHLIDREVGLTFKRASAKLGFLGKMKLGGGLI
AGLFAADEVGEEEIEKLKQGDMLEASFGDFANESPELYQTIIAERDRYMATRLREEVNSATPKVLVVVGAGHLTGLAKHL
ENDTEPPTELRALLEKVQQKKRVPWFTLGLMALIATGIVHGFLRGGFAMGTDLLLQWALYTSTLAALGCALAGSHPLSVL
VALLVAPFKPFRVTLPTGAFAALVEVHMRKPAYQDFLTLRDDAQTLYGWYKNRVSRVMLTFAFTNLGSMLGVWIAVVSIY
NRLHS

Specific function: Unknown

COG id: COG1916

COG function: function code S; Uncharacterized homolog of PrgY (pheromone shutdown protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33342278, Length=207, Percent_Identity=32.3671497584541, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71988206, Length=237, Percent_Identity=25.7383966244726, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71988217, Length=237, Percent_Identity=25.7383966244726, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002816
- InterPro:   IPR005230 [H]

Pfam domain/function: PF01963 TraB [H]

EC number: NA

Molecular weight: Translated: 44174; Mature: 44174

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSVSPQQDALTGQPLRVVERDGVHYTLLGTAHISQASVAAVKQEVESGCYDAIAVELD
CCCCCCCCCCCCCCCCHHEEECCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHEEEEC
AQRLQALCDPDTLAKLDLIQVIRKGQLALFAANLALAAYQRRLAKQLGIEPGAELKTAVT
HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
MARERDLPVHLIDREVGLTFKRASAKLGFLGKMKLGGGLIAGLFAADEVGEEEIEKLKQG
HHHHCCCCEEEECHHHCCEEHHHCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHCC
DMLEASFGDFANESPELYQTIIAERDRYMATRLREEVNSATPKVLVVVGAGHLTGLAKHL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
ENDTEPPTELRALLEKVQQKKRVPWFTLGLMALIATGIVHGFLRGGFAMGTDLLLQWALY
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TSTLAALGCALAGSHPLSVLVALLVAPFKPFRVTLPTGAFAALVEVHMRKPAYQDFLTLR
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHH
DDAQTLYGWYKNRVSRVMLTFAFTNLGSMLGVWIAVVSIYNRLHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPSVSPQQDALTGQPLRVVERDGVHYTLLGTAHISQASVAAVKQEVESGCYDAIAVELD
CCCCCCCCCCCCCCCCHHEEECCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHEEEEC
AQRLQALCDPDTLAKLDLIQVIRKGQLALFAANLALAAYQRRLAKQLGIEPGAELKTAVT
HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
MARERDLPVHLIDREVGLTFKRASAKLGFLGKMKLGGGLIAGLFAADEVGEEEIEKLKQG
HHHHCCCCEEEECHHHCCEEHHHCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHCC
DMLEASFGDFANESPELYQTIIAERDRYMATRLREEVNSATPKVLVVVGAGHLTGLAKHL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
ENDTEPPTELRALLEKVQQKKRVPWFTLGLMALIATGIVHGFLRGGFAMGTDLLLQWALY
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TSTLAALGCALAGSHPLSVLVALLVAPFKPFRVTLPTGAFAALVEVHMRKPAYQDFLTLR
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHH
DDAQTLYGWYKNRVSRVMLTFAFTNLGSMLGVWIAVVSIYNRLHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]