Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682052
Identifier: 182682052
GI number: 182682052
Start: 1700311
End: 1701375
Strand: Reverse
Name: 182682052
Synonym: XfasM23_1530
Alternate gene names: NA
Gene position: 1701375-1700311 (Counterclockwise)
Preceding gene: 182682053
Following gene: 182682051
Centisome position: 67.1
GC content: 52.77
Gene sequence:
>1065_bases ATGCACATCGTTAACGCACAGGTGCCTTACGCTGAGCGGTGCATTTTCATTGAGGGTGGTACTGCTGTCATATTGCCGTT TCTCAATGTCGCCAAAGGCACTGACAAAAACACTTCTTGCTACGAACTCTTCCTGGATACGAACGCGCTGACCAATGTGC AGTGGTTCGCGCAGTTGCCCGAATACATTCGAACGCGCAGTGTCATCAATCCTTGGTTTGCATTGCAGGAACAGTGGCTC TCTAACCCGGAATTTAGAGCATCGCCTACGAATCGCATTGAGGCGATGATTCAAAAGTTGGCAAAGTTAGGGATGAGATT CCGCGAGCAGTATGCACAGCAGCAGGTGCGCTTGCTGCGTAACAACGATGCAGTACTACGCCGCCATTGCAGCATCGTTG TTTGCTACGTCGTGATAATGAAGTCGCTGCTGACGCAACAGCTCCCTGCGGAGCAGCTGTTGCAGCATCTTGAGCACATC GTGCAGCAGGACATCCCAAGATCCCCAGCGCTCATCACGTTGACAGCGTTGGGGACGTTGTTGAAGGGCCACCAGTCGCT CAAGTTCACTGATGATCCCAAGCCTGCTTTCTCTTACCTAGAGTCGTTTCTCGCTTTCCAGCCAGGGCGGAAGGACGAGA CTGATCATATGAATGTCCCCTATTTACGAAACCGCGCGTTCGATCTCAATTTATGGCTCACCCTACCCGTATTGCGCCAA CACGGCTATCGCTTTGAGGGGGTACCGGCGATTGTGACTGGGGATCGCGTATTGCATCGCTTGATTCTTCGGGTCATTCC GCCTTTTGGGCACAAGAAACCAATCATGGCTTTCGGACTTTTAGAAGAGGGGCTGCCGAGGTGTTTATGGGAAAGAGTCA GAGCCATCAGTGGCTCCGTTCAGGTCCGTGGCGAGCCGACGCACAAGGAGCATTTGGCACGCATGTCAACTCTCTTCGAC CTGGCGAAGGCGTGCTGTGCAGATGAGCGTGAGCGGGATGCACTGGATGAGATGTTTTCACAGTGGTGGCGTCCGGGTTT CGACAAACAGATCAATTTCTCTTGA
Upstream 100 bases:
>100_bases GATATTTCCGGAAAACCGCCAGCCACGATTGAGTGGGAGTGAAATCGTGTCCCTTCTTGCTTAAAGTCCCTTCTTGCTTA AAAAAGAATCAAGACAGCAC
Downstream 100 bases:
>100_bases GCCTGCTCATCAGAGGCTGAGTGTGACCTTCGCCATTACCCTACGGCGTGAGAAGGGAAGCGTGGGGCACAGGTCTCTCA CATCTATAACTGCGTCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MHIVNAQVPYAERCIFIEGGTAVILPFLNVAKGTDKNTSCYELFLDTNALTNVQWFAQLPEYIRTRSVINPWFALQEQWL SNPEFRASPTNRIEAMIQKLAKLGMRFREQYAQQQVRLLRNNDAVLRRHCSIVVCYVVIMKSLLTQQLPAEQLLQHLEHI VQQDIPRSPALITLTALGTLLKGHQSLKFTDDPKPAFSYLESFLAFQPGRKDETDHMNVPYLRNRAFDLNLWLTLPVLRQ HGYRFEGVPAIVTGDRVLHRLILRVIPPFGHKKPIMAFGLLEEGLPRCLWERVRAISGSVQVRGEPTHKEHLARMSTLFD LAKACCADERERDALDEMFSQWWRPGFDKQINFS
Sequences:
>Translated_354_residues MHIVNAQVPYAERCIFIEGGTAVILPFLNVAKGTDKNTSCYELFLDTNALTNVQWFAQLPEYIRTRSVINPWFALQEQWL SNPEFRASPTNRIEAMIQKLAKLGMRFREQYAQQQVRLLRNNDAVLRRHCSIVVCYVVIMKSLLTQQLPAEQLLQHLEHI VQQDIPRSPALITLTALGTLLKGHQSLKFTDDPKPAFSYLESFLAFQPGRKDETDHMNVPYLRNRAFDLNLWLTLPVLRQ HGYRFEGVPAIVTGDRVLHRLILRVIPPFGHKKPIMAFGLLEEGLPRCLWERVRAISGSVQVRGEPTHKEHLARMSTLFD LAKACCADERERDALDEMFSQWWRPGFDKQINFS >Mature_354_residues MHIVNAQVPYAERCIFIEGGTAVILPFLNVAKGTDKNTSCYELFLDTNALTNVQWFAQLPEYIRTRSVINPWFALQEQWL SNPEFRASPTNRIEAMIQKLAKLGMRFREQYAQQQVRLLRNNDAVLRRHCSIVVCYVVIMKSLLTQQLPAEQLLQHLEHI VQQDIPRSPALITLTALGTLLKGHQSLKFTDDPKPAFSYLESFLAFQPGRKDETDHMNVPYLRNRAFDLNLWLTLPVLRQ HGYRFEGVPAIVTGDRVLHRLILRVIPPFGHKKPIMAFGLLEEGLPRCLWERVRAISGSVQVRGEPTHKEHLARMSTLFD LAKACCADERERDALDEMFSQWWRPGFDKQINFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40861; Mature: 40861
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIVNAQVPYAERCIFIEGGTAVILPFLNVAKGTDKNTSCYELFLDTNALTNVQWFAQLP CCEECCCCCHHHEEEEEECCCEEEHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHH EYIRTRSVINPWFALQEQWLSNPEFRASPTNRIEAMIQKLAKLGMRFREQYAQQQVRLLR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNDAVLRRHCSIVVCYVVIMKSLLTQQLPAEQLLQHLEHIVQQDIPRSPALITLTALGTL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHH LKGHQSLKFTDDPKPAFSYLESFLAFQPGRKDETDHMNVPYLRNRAFDLNLWLTLPVLRQ HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCEEEEEHEEEHHHHH HGYRFEGVPAIVTGDRVLHRLILRVIPPFGHKKPIMAFGLLEEGLPRCLWERVRAISGSV CCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE QVRGEPTHKEHLARMSTLFDLAKACCADERERDALDEMFSQWWRPGFDKQINFS EECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MHIVNAQVPYAERCIFIEGGTAVILPFLNVAKGTDKNTSCYELFLDTNALTNVQWFAQLP CCEECCCCCHHHEEEEEECCCEEEHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHH EYIRTRSVINPWFALQEQWLSNPEFRASPTNRIEAMIQKLAKLGMRFREQYAQQQVRLLR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNDAVLRRHCSIVVCYVVIMKSLLTQQLPAEQLLQHLEHIVQQDIPRSPALITLTALGTL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHH LKGHQSLKFTDDPKPAFSYLESFLAFQPGRKDETDHMNVPYLRNRAFDLNLWLTLPVLRQ HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCEEEEEHEEEHHHHH HGYRFEGVPAIVTGDRVLHRLILRVIPPFGHKKPIMAFGLLEEGLPRCLWERVRAISGSV CCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE QVRGEPTHKEHLARMSTLFDLAKACCADERERDALDEMFSQWWRPGFDKQINFS EECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA