Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682051
Identifier: 182682051
GI number: 182682051
Start: 1698867
End: 1699766
Strand: Reverse
Name: 182682051
Synonym: XfasM23_1529
Alternate gene names: NA
Gene position: 1699766-1698867 (Counterclockwise)
Preceding gene: 182682052
Following gene: 182682049
Centisome position: 67.03
GC content: 51.44
Gene sequence:
>900_bases ATGATCATGGACGAAAGCAAAGTGTTGGTGAATGAATTAGTGGATGCGGCTATTGATCGGACTGTGTCATTGGCTCATTT GTTGCGTTTGGCGTTGGTGGTTGCCTCGCGCTTGGAACTTCCCGAGCTGGTGGCATGGATCAACAGAGAACTGAACGGCT ACTCGTCCGATGACGTTCCTGACTATCGGCGGGTATCGTTGCAGTGGATGGTCGAGGATCCAGACAATGGCCGGGTTCCT TTCTTTCCTCCTCCTAAGATTGCTAAACAGGGCTCTCAAGACCCTATAAAGCAGTCGGTTCATGTGCTGATCCAGATGAC TCAGGAACCCCCGGGGACGAGCTTCAGTTATTTCCACCCTGAGTTAGAGTGCCGGTTGCCAGAGGTGATGCGAGGTTCCT TCGGAGAGGATGTGCGTCTGGTGCGCGTGTTATCGAACCTACAGGCGCATGGAATCCTCGAAAAGGTGCGTGACAAGGTG CTGCAATGGGCACTCAATCTGGAGGCTAAGGGGGTGCTTGGCCAGGGAAGGCTCTTCTCGCCGCAGGAAAAGCAGATTGT GAAAAACGATACTGTTAACGTCGGAGGCGTTAAAAATTCCACTGACCAAATCAGGGCGATGGGTTCTCATGACGCCCATA CTCATACTCACACGGTGGAAGACATCGACGCGTTGTTGCCGTTGATCGGATGTCTGCGTAAAGCTATCGACGAAGGGACT CTCTTACAAGATATTCACCACACGTTGCAAGCTAATCTAATGACTTTGCAAGCGCAGGCCATTTCATCAAAACCGGAATG GCCCGCCATAAAAATGCTCCTGCATAGGATCAAGGCCATGTTAGATAACTCAGATGTGGCTGCGACAGAAGTACTCTCCC ATCTGAGAGCCATTCGGTGA
Upstream 100 bases:
>100_bases GTTAACCAGAGTGAGCTTGCCATTGCGTTGTTGCAGATGATGGCCGTGTTTGGGAGAAGTAACGATGGCACAATGAGCAT CTAGTTCCCTGACGGTTGCC
Downstream 100 bases:
>100_bases TGCCAATGGCGCTTGGCTTCTCTATCGTCATTCCCTCGTTGTGCTGCCAAGTCTCGGATTGTCTGGCAGCGCTAACCAAG TAAATCACGTTTGGAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MIMDESKVLVNELVDAAIDRTVSLAHLLRLALVVASRLELPELVAWINRELNGYSSDDVPDYRRVSLQWMVEDPDNGRVP FFPPPKIAKQGSQDPIKQSVHVLIQMTQEPPGTSFSYFHPELECRLPEVMRGSFGEDVRLVRVLSNLQAHGILEKVRDKV LQWALNLEAKGVLGQGRLFSPQEKQIVKNDTVNVGGVKNSTDQIRAMGSHDAHTHTHTVEDIDALLPLIGCLRKAIDEGT LLQDIHHTLQANLMTLQAQAISSKPEWPAIKMLLHRIKAMLDNSDVAATEVLSHLRAIR
Sequences:
>Translated_299_residues MIMDESKVLVNELVDAAIDRTVSLAHLLRLALVVASRLELPELVAWINRELNGYSSDDVPDYRRVSLQWMVEDPDNGRVP FFPPPKIAKQGSQDPIKQSVHVLIQMTQEPPGTSFSYFHPELECRLPEVMRGSFGEDVRLVRVLSNLQAHGILEKVRDKV LQWALNLEAKGVLGQGRLFSPQEKQIVKNDTVNVGGVKNSTDQIRAMGSHDAHTHTHTVEDIDALLPLIGCLRKAIDEGT LLQDIHHTLQANLMTLQAQAISSKPEWPAIKMLLHRIKAMLDNSDVAATEVLSHLRAIR >Mature_299_residues MIMDESKVLVNELVDAAIDRTVSLAHLLRLALVVASRLELPELVAWINRELNGYSSDDVPDYRRVSLQWMVEDPDNGRVP FFPPPKIAKQGSQDPIKQSVHVLIQMTQEPPGTSFSYFHPELECRLPEVMRGSFGEDVRLVRVLSNLQAHGILEKVRDKV LQWALNLEAKGVLGQGRLFSPQEKQIVKNDTVNVGGVKNSTDQIRAMGSHDAHTHTHTVEDIDALLPLIGCLRKAIDEGT LLQDIHHTLQANLMTLQAQAISSKPEWPAIKMLLHRIKAMLDNSDVAATEVLSHLRAIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33447; Mature: 33447
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMDESKVLVNELVDAAIDRTVSLAHLLRLALVVASRLELPELVAWINRELNGYSSDDVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC DYRRVSLQWMVEDPDNGRVPFFPPPKIAKQGSQDPIKQSVHVLIQMTQEPPGTSFSYFHP CHHEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEECC ELECRLPEVMRGSFGEDVRLVRVLSNLQAHGILEKVRDKVLQWALNLEAKGVLGQGRLFS HHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PQEKQIVKNDTVNVGGVKNSTDQIRAMGSHDAHTHTHTVEDIDALLPLIGCLRKAIDEGT CHHHHHHHCCCEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH LLQDIHHTLQANLMTLQAQAISSKPEWPAIKMLLHRIKAMLDNSDVAATEVLSHLRAIR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIMDESKVLVNELVDAAIDRTVSLAHLLRLALVVASRLELPELVAWINRELNGYSSDDVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC DYRRVSLQWMVEDPDNGRVPFFPPPKIAKQGSQDPIKQSVHVLIQMTQEPPGTSFSYFHP CHHEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEECC ELECRLPEVMRGSFGEDVRLVRVLSNLQAHGILEKVRDKVLQWALNLEAKGVLGQGRLFS HHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PQEKQIVKNDTVNVGGVKNSTDQIRAMGSHDAHTHTHTVEDIDALLPLIGCLRKAIDEGT CHHHHHHHCCCEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH LLQDIHHTLQANLMTLQAQAISSKPEWPAIKMLLHRIKAMLDNSDVAATEVLSHLRAIR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA