| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682027
Identifier: 182682027
GI number: 182682027
Start: 1664925
End: 1665548
Strand: Direct
Name: 182682027
Synonym: XfasM23_1503
Alternate gene names: NA
Gene position: 1664925-1665548 (Clockwise)
Preceding gene: 182682026
Following gene: 182682028
Centisome position: 65.66
GC content: 37.5
Gene sequence:
>624_bases ATGAATATTCCAAGAGTATTTAAATCTCTACTGAAATTATGTGGAATTGTTGCGCTGACCTTGCTTATGGTATTCGGCGC TATTCTCTCCTGCGGGAAAAATAATATGACAAAAACAACACCGCAACAGGCCGCTGCACAGGACATTAAGGAGGTCAGTA AAATAATGATGCTTCAATCGGATGATCACAGCTACAAAAAATGTTTCAAGTTTCCCCCAGAAGTGTGGCCAAGCAAACTT CCACCAAACATGATCATATTTCGTTTTAAGACTATTGAGTATCTTTCTGGTATCGAAACATCTCCAGGTAATCTCGGTGA GGCCGGAACCTCGATAGTTTCTCTAGCCTTTTTCCCTGATAAACCATGGAAAGAACATTATATCCATACCCTTTCACAGG CTTATAGGAATGGGAAAGTTGAAATTATTGGGGAGTATAAAGAATTTAATTTTTATAATCTTAGGGATTTCCTTTATTCG GCGATTGATAAGGATGGAATTTTTAATATTGAATATGATGCTGGTGATGGTCTACCACGAAAAAAAGAGGAGCGAATCCG TGAATTAAAATTAATTGTTGATTTTATTGAATCCCATACCATCCCATGTCAAGGAGAATCATGA
Upstream 100 bases:
>100_bases CACAAGACCGCGACGCACCGTCTATACGTACAGTGATGGATCAGGTCGACCACAAAGTTAATAAAATAAAGACACAGCAT CATCCTGCAGCGGTTTAATA
Downstream 100 bases:
>100_bases TGACAAGTTCAGATTTTTATTTTGATCAAGCCACGTTGGACCGTGCCAACACCTATAAAAATGCCGGGAATTATCCGGCG ATGTACCAGACATTGTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNIPRVFKSLLKLCGIVALTLLMVFGAILSCGKNNMTKTTPQQAAAQDIKEVSKIMMLQSDDHSYKKCFKFPPEVWPSKL PPNMIIFRFKTIEYLSGIETSPGNLGEAGTSIVSLAFFPDKPWKEHYIHTLSQAYRNGKVEIIGEYKEFNFYNLRDFLYS AIDKDGIFNIEYDAGDGLPRKKEERIRELKLIVDFIESHTIPCQGES
Sequences:
>Translated_207_residues MNIPRVFKSLLKLCGIVALTLLMVFGAILSCGKNNMTKTTPQQAAAQDIKEVSKIMMLQSDDHSYKKCFKFPPEVWPSKL PPNMIIFRFKTIEYLSGIETSPGNLGEAGTSIVSLAFFPDKPWKEHYIHTLSQAYRNGKVEIIGEYKEFNFYNLRDFLYS AIDKDGIFNIEYDAGDGLPRKKEERIRELKLIVDFIESHTIPCQGES >Mature_207_residues MNIPRVFKSLLKLCGIVALTLLMVFGAILSCGKNNMTKTTPQQAAAQDIKEVSKIMMLQSDDHSYKKCFKFPPEVWPSKL PPNMIIFRFKTIEYLSGIETSPGNLGEAGTSIVSLAFFPDKPWKEHYIHTLSQAYRNGKVEIIGEYKEFNFYNLRDFLYS AIDKDGIFNIEYDAGDGLPRKKEERIRELKLIVDFIESHTIPCQGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23610; Mature: 23610
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPRVFKSLLKLCGIVALTLLMVFGAILSCGKNNMTKTTPQQAAAQDIKEVSKIMMLQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC DDHSYKKCFKFPPEVWPSKLPPNMIIFRFKTIEYLSGIETSPGNLGEAGTSIVSLAFFPD CCHHHHHHHCCCHHCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCHHHHHHEEEEECCC KPWKEHYIHTLSQAYRNGKVEIIGEYKEFNFYNLRDFLYSAIDKDGIFNIEYDAGDGLPR CCHHHHHHHHHHHHHHCCCEEEEECHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC KKEERIRELKLIVDFIESHTIPCQGES HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNIPRVFKSLLKLCGIVALTLLMVFGAILSCGKNNMTKTTPQQAAAQDIKEVSKIMMLQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC DDHSYKKCFKFPPEVWPSKLPPNMIIFRFKTIEYLSGIETSPGNLGEAGTSIVSLAFFPD CCHHHHHHHCCCHHCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCHHHHHHEEEEECCC KPWKEHYIHTLSQAYRNGKVEIIGEYKEFNFYNLRDFLYSAIDKDGIFNIEYDAGDGLPR CCHHHHHHHHHHHHHHCCCEEEEECHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC KKEERIRELKLIVDFIESHTIPCQGES HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA