| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682028
Identifier: 182682028
GI number: 182682028
Start: 1665548
End: 1665817
Strand: Direct
Name: 182682028
Synonym: XfasM23_1504
Alternate gene names: NA
Gene position: 1665548-1665817 (Clockwise)
Preceding gene: 182682027
Following gene: 182682029
Centisome position: 65.68
GC content: 49.26
Gene sequence:
>270_bases ATGACAAGTTCAGATTTTTATTTTGATCAAGCCACGTTGGACCGTGCCAACACCTATAAAAATGCCGGGAATTATCCGGC GATGTACCAGACATTGTCCGATGCCGTCAAAGCCAGTGGTGGCGATGCCAGATTGGCGAATGGGTTCAAGAATGCGGGGG ACATCCATTCCGGGCAACACCGCGACGCACCGTCTATACGTGCAGTGATGGATCAGGCCGACCACAAAGTTAATAAAATA AAGACACAGCATCATCTTGCGGCGGTTTAA
Upstream 100 bases:
>100_bases GTGATGGTCTACCACGAAAAAAAGAGGAGCGAATCCGTGAATTAAAATTAATTGTTGATTTTATTGAATCCCATACCATC CCATGTCAAGGAGAATCATG
Downstream 100 bases:
>100_bases TCATGAATATTCCAAGACTATTGAAACGCTTACTGAAATTATGTGGACTGCTTGCACTTGCCTTGCTGATGGTATTCGGC GCTATTCTCTCCTGCGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTSSDFYFDQATLDRANTYKNAGNYPAMYQTLSDAVKASGGDARLANGFKNAGDIHSGQHRDAPSIRAVMDQADHKVNKI KTQHHLAAV
Sequences:
>Translated_89_residues MTSSDFYFDQATLDRANTYKNAGNYPAMYQTLSDAVKASGGDARLANGFKNAGDIHSGQHRDAPSIRAVMDQADHKVNKI KTQHHLAAV >Mature_88_residues TSSDFYFDQATLDRANTYKNAGNYPAMYQTLSDAVKASGGDARLANGFKNAGDIHSGQHRDAPSIRAVMDQADHKVNKIK TQHHLAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9695; Mature: 9564
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSDFYFDQATLDRANTYKNAGNYPAMYQTLSDAVKASGGDARLANGFKNAGDIHSGQH CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCC RDAPSIRAVMDQADHKVNKIKTQHHLAAV CCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSSDFYFDQATLDRANTYKNAGNYPAMYQTLSDAVKASGGDARLANGFKNAGDIHSGQH CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCC RDAPSIRAVMDQADHKVNKIKTQHHLAAV CCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA