Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is tagA [H]
Identifier: 182681998
GI number: 182681998
Start: 1623902
End: 1624675
Strand: Reverse
Name: tagA [H]
Synonym: XfasM23_1473
Alternate gene names: 182681998
Gene position: 1624675-1623902 (Counterclockwise)
Preceding gene: 182681999
Following gene: 182681997
Centisome position: 64.07
GC content: 47.93
Gene sequence:
>774_bases GTGACGATCTCTGGCATTTCTTCCGATCAACCCTTCATTGAAACGATTGATACTCTGATGCTTGGTGGGTTTCCGGTGTT ATCAACCACGCCGTCTGCCTTTGTTGCTTCGCTGTACCGTAGTTTGATTGAAGAAAGACAGCAGCGGGTATTTTTTGCTA ATACAAATTTTATCGTGCAATGCCAGTCGCTCCGGGGGCGGATGTATTCTGAGCGGGTTTGTATCCTCAACGATGGGATA GGTATGGATTTGGCTGCGCTGTTCATTCATGGTCGTCGTTTTGTTAGTAATCTGAATGGTACTGATTTGATCCCGTATCT ATGTCAGCACGCTCCACGTCCGTTGCGCTTTTTCTTGCTTGGTGCCAAGCCTGGTGTTGCCGATATGGCGGCGCAGATGT TGTGTCAGTTGGGGCAATTAGTGGTCGGTACTTGTGATGGGTATGCGCAGTTCGTTGCGACTGGTGAGGATTTAGTTGAG TCAATTAATGCCAGCGGTGCCGATGTGTTGTTGGTTGCTTTGGGTAATCCTGTGCAGGAGCGTTGGATTCTTGATCATGA TGTGCAGTTGCGTACGCCATTGGTTTTTGGTGTTGGTGCGTTGTTTGATTTTATGTCTGGTAATGTGCGGCGTGCGCCTT TATGGGTACGTCGTGTACGTGGTGAATGGTTGTACCGATTGTTGTTGGAGCCAAGACGTTTATTAAAACGCTACAGTTGG GATCTGCTTCGTTTTTTCGGTGTGTGTTTATTGCGGCGAAGGGAAGGGGATTAA
Upstream 100 bases:
>100_bases GTGTCTCTATAGAAGGTGTGAGGTGTGTTTAAACGTGTGGAGTCATCTTTACTGTTGATGATTTTCCCGTACTGGGGTAT GGGCTTTTGGAGACTTTGTT
Downstream 100 bases:
>100_bases TTTTCGTGTTTTCTGATTTTTTATTTATCAGTATTGATGTATGCATTTTCAGGATGTTTTTGTCCTGTTTTGTTACATTT CTGGTGCTGATACTCTGTGT
Product: WecB/TagA/CpsF family glycosyl transferase
Products: NA
Alternate protein names: Major teichoic acid biosynthesis protein A; N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTISGISSDQPFIETIDTLMLGGFPVLSTTPSAFVASLYRSLIEERQQRVFFANTNFIVQCQSLRGRMYSERVCILNDGI GMDLAALFIHGRRFVSNLNGTDLIPYLCQHAPRPLRFFLLGAKPGVADMAAQMLCQLGQLVVGTCDGYAQFVATGEDLVE SINASGADVLLVALGNPVQERWILDHDVQLRTPLVFGVGALFDFMSGNVRRAPLWVRRVRGEWLYRLLLEPRRLLKRYSW DLLRFFGVCLLRRREGD
Sequences:
>Translated_257_residues MTISGISSDQPFIETIDTLMLGGFPVLSTTPSAFVASLYRSLIEERQQRVFFANTNFIVQCQSLRGRMYSERVCILNDGI GMDLAALFIHGRRFVSNLNGTDLIPYLCQHAPRPLRFFLLGAKPGVADMAAQMLCQLGQLVVGTCDGYAQFVATGEDLVE SINASGADVLLVALGNPVQERWILDHDVQLRTPLVFGVGALFDFMSGNVRRAPLWVRRVRGEWLYRLLLEPRRLLKRYSW DLLRFFGVCLLRRREGD >Mature_256_residues TISGISSDQPFIETIDTLMLGGFPVLSTTPSAFVASLYRSLIEERQQRVFFANTNFIVQCQSLRGRMYSERVCILNDGIG MDLAALFIHGRRFVSNLNGTDLIPYLCQHAPRPLRFFLLGAKPGVADMAAQMLCQLGQLVVGTCDGYAQFVATGEDLVES INASGADVLLVALGNPVQERWILDHDVQLRTPLVFGVGALFDFMSGNVRRAPLWVRRVRGEWLYRLLLEPRRLLKRYSWD LLRFFGVCLLRRREGD
Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=161, Percent_Identity=37.2670807453416, Blast_Score=81, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: =2.4.1.187 [H]
Molecular weight: Translated: 28948; Mature: 28817
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISGISSDQPFIETIDTLMLGGFPVLSTTPSAFVASLYRSLIEERQQRVFFANTNFIVQ CCCCCCCCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCEEEE CQSLRGRMYSERVCILNDGIGMDLAALFIHGRRFVSNLNGTDLIPYLCQHAPRPLRFFLL EHHHHCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEE GAKPGVADMAAQMLCQLGQLVVGTCDGYAQFVATGEDLVESINASGADVLLVALGNPVQE ECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHCCCCCCEEEEECCCCHHH RWILDHDVQLRTPLVFGVGALFDFMSGNVRRAPLWVRRVRGEWLYRLLLEPRRLLKRYSW HHCCCCCCEECCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCH DLLRFFGVCLLRRREGD HHHHHHHHHHHHHCCCC >Mature Secondary Structure TISGISSDQPFIETIDTLMLGGFPVLSTTPSAFVASLYRSLIEERQQRVFFANTNFIVQ CCCCCCCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCEEEE CQSLRGRMYSERVCILNDGIGMDLAALFIHGRRFVSNLNGTDLIPYLCQHAPRPLRFFLL EHHHHCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEE GAKPGVADMAAQMLCQLGQLVVGTCDGYAQFVATGEDLVESINASGADVLLVALGNPVQE ECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHCCCCCCEEEEECCCCHHH RWILDHDVQLRTPLVFGVGALFDFMSGNVRRAPLWVRRVRGEWLYRLLLEPRRLLKRYSW HHCCCCCCEECCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCH DLLRFFGVCLLRRREGD HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1906926; 9384377; 11882717 [H]