Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681999
Identifier: 182681999
GI number: 182681999
Start: 1624846
End: 1626030
Strand: Reverse
Name: 182681999
Synonym: XfasM23_1474
Alternate gene names: NA
Gene position: 1626030-1624846 (Counterclockwise)
Preceding gene: 182682000
Following gene: 182681998
Centisome position: 64.13
GC content: 44.98
Gene sequence:
>1185_bases ATGAATGCTTCTACAAGTGCGGTATTAAGCCACGATGCAAATGTTTCTACGATGTCCGTTGGAGTGCGTCCCAATTATCT TGTTTTGTCAGCGCATGATTATCGTACACCACGTCGTGCCAGTATTCATTTCATTACGGATGAATTGGCTAAGCGTGGTG ATACTCGTTTTTTCTCATTACGTTACAGTTTGTTGTCCAGGCTAAAAAAAGATTTGCGTGTCCCGTTGGATGAGTATGCT AATCATGTGGTTGAGTATAATGGTGTGCATTGTTATCTATGGCGTACGTTGGTACATCCGTTTAATACACGTAGATCATG GTTGCGTGGTATTGAGGATATGCTCTTTCGCTGGTATGTGCAGCATCCACCGGAGATTTTATTGCAGTGGATACGCGAAG CAGACATCATTTTGTTCGAGAGTGGTACTGCAGTTGCGTTCATTGATATGGCGAAGCGTATTAATCCATCTGCCCGTCTT ATTTATAATGCTTCAGACAGTCTCAGTGCGATTAATGTAGCATCTTATATCGAGCGTGAATTTCAGCGGGTTGCTCCAAG TTTGGATGTGATCGCTGTTGTTTCTCCTGCGATGGCTAAAGAAATTCCTAGTCATGGCAATGTGTTTTATATCGGCCATG GGGTTCTTCAAAATTTGAGTGAGCTTGGTGGTCCATCGCCATATGAGGGTGGGATCCATGCCGTATCGGTTGGTTCGATG TTGTTTGATCCGTTATTTTTTGTGGTTGCAGGGAAGGAGTTTCCACATATTACTTTTCATGTAATTGGTTCAGGGATGGG GCGACATCCTGATTATCCTGATAATGTCGTGGTTTACGGTGAGATGAAGTACGTTGAAACTATTCGTTATATTAGGCATG CATCTTTCGGTATTGCGCCGTATGTGTCACAGCAGGTTCCAGAATATTTAGCCGATAGTTCGATGAAACTGTTGCAGTAC GACTTTTTCGGGTTACCGGCGGTGTGTCCGCATGCGGTGGTCGGCTCTTATCCGACACGCTTTGGTTATACTCCAGGGAA TGCTATTGAGTTGGTGGCTGCGATCAAGCGTGCGTTGCAAGCGCCGCATCAGCAGTCTCGTCAATATTTGAGTTGGGAAG AGGTTGTTGCTCGTGTTTTGGATCCTACTGCCTATGAGGGAACCAAGATATTACCTGCGGTGTGA
Upstream 100 bases:
>100_bases GATCATGAGGAGAGTGAGGAAGGGATCTTAATTCATCGGTTCTTAGGATTTTTTTGAAAATTAATGGAATACGTTAATTC AGTGAATAACGAGCGAGCTT
Downstream 100 bases:
>100_bases GCGTATCTGTATCCGTAGCTTTATTTTTCATTATTGGTGGTGAAGGAGCGAAAGTTGATGCATAACTTTGGTGTCTCTAT AGAAGGTGTGAGGTGTGTTT
Product: xanthan biosynthesis glucuronosyltransferase GumK
Products: NA
Alternate protein names: UDP-GlcA Beta-Glucuronosyltransferase; GumK-Related Protein; Glucuronyl Transferase; Glucuronosyltransferase; Xanthan Biosynthesis Glucuronosyltransferase GumK
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MNASTSAVLSHDANVSTMSVGVRPNYLVLSAHDYRTPRRASIHFITDELAKRGDTRFFSLRYSLLSRLKKDLRVPLDEYA NHVVEYNGVHCYLWRTLVHPFNTRRSWLRGIEDMLFRWYVQHPPEILLQWIREADIILFESGTAVAFIDMAKRINPSARL IYNASDSLSAINVASYIEREFQRVAPSLDVIAVVSPAMAKEIPSHGNVFYIGHGVLQNLSELGGPSPYEGGIHAVSVGSM LFDPLFFVVAGKEFPHITFHVIGSGMGRHPDYPDNVVVYGEMKYVETIRYIRHASFGIAPYVSQQVPEYLADSSMKLLQY DFFGLPAVCPHAVVGSYPTRFGYTPGNAIELVAAIKRALQAPHQQSRQYLSWEEVVARVLDPTAYEGTKILPAV
Sequences:
>Translated_394_residues MNASTSAVLSHDANVSTMSVGVRPNYLVLSAHDYRTPRRASIHFITDELAKRGDTRFFSLRYSLLSRLKKDLRVPLDEYA NHVVEYNGVHCYLWRTLVHPFNTRRSWLRGIEDMLFRWYVQHPPEILLQWIREADIILFESGTAVAFIDMAKRINPSARL IYNASDSLSAINVASYIEREFQRVAPSLDVIAVVSPAMAKEIPSHGNVFYIGHGVLQNLSELGGPSPYEGGIHAVSVGSM LFDPLFFVVAGKEFPHITFHVIGSGMGRHPDYPDNVVVYGEMKYVETIRYIRHASFGIAPYVSQQVPEYLADSSMKLLQY DFFGLPAVCPHAVVGSYPTRFGYTPGNAIELVAAIKRALQAPHQQSRQYLSWEEVVARVLDPTAYEGTKILPAV >Mature_394_residues MNASTSAVLSHDANVSTMSVGVRPNYLVLSAHDYRTPRRASIHFITDELAKRGDTRFFSLRYSLLSRLKKDLRVPLDEYA NHVVEYNGVHCYLWRTLVHPFNTRRSWLRGIEDMLFRWYVQHPPEILLQWIREADIILFESGTAVAFIDMAKRINPSARL IYNASDSLSAINVASYIEREFQRVAPSLDVIAVVSPAMAKEIPSHGNVFYIGHGVLQNLSELGGPSPYEGGIHAVSVGSM LFDPLFFVVAGKEFPHITFHVIGSGMGRHPDYPDNVVVYGEMKYVETIRYIRHASFGIAPYVSQQVPEYLADSSMKLLQY DFFGLPAVCPHAVVGSYPTRFGYTPGNAIELVAAIKRALQAPHQQSRQYLSWEEVVARVLDPTAYEGTKILPAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44290; Mature: 44290
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASTSAVLSHDANVSTMSVGVRPNYLVLSAHDYRTPRRASIHFITDELAKRGDTRFFSL CCCCCCCCEECCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEHHHHHHCCCCCHHHH RYSLLSRLKKDLRVPLDEYANHVVEYNGVHCYLWRTLVHPFNTRRSWLRGIEDMLFRWYV HHHHHHHHHHHHCCCHHHHHHHHEECCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHH QHPPEILLQWIREADIILFESGTAVAFIDMAKRINPSARLIYNASDSLSAINVASYIERE CCCHHHHHHHHHCCCEEEEECCCEEEEEHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH FQRVAPSLDVIAVVSPAMAKEIPSHGNVFYIGHGVLQNLSELGGPSPYEGGIHAVSVGSM HHHHCCCCCCHHHHCHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEEEEEHHHH LFDPLFFVVAGKEFPHITFHVIGSGMGRHPDYPDNVVVYGEMKYVETIRYIRHASFGIAP HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCH YVSQQVPEYLADSSMKLLQYDFFGLPAVCPHAVVGSYPTRFGYTPGNAIELVAAIKRALQ HHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH APHQQSRQYLSWEEVVARVLDPTAYEGTKILPAV CCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNASTSAVLSHDANVSTMSVGVRPNYLVLSAHDYRTPRRASIHFITDELAKRGDTRFFSL CCCCCCCCEECCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEHHHHHHCCCCCHHHH RYSLLSRLKKDLRVPLDEYANHVVEYNGVHCYLWRTLVHPFNTRRSWLRGIEDMLFRWYV HHHHHHHHHHHHCCCHHHHHHHHEECCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHH QHPPEILLQWIREADIILFESGTAVAFIDMAKRINPSARLIYNASDSLSAINVASYIERE CCCHHHHHHHHHCCCEEEEECCCEEEEEHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH FQRVAPSLDVIAVVSPAMAKEIPSHGNVFYIGHGVLQNLSELGGPSPYEGGIHAVSVGSM HHHHCCCCCCHHHHCHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEEEEEHHHH LFDPLFFVVAGKEFPHITFHVIGSGMGRHPDYPDNVVVYGEMKYVETIRYIRHASFGIAP HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCH YVSQQVPEYLADSSMKLLQYDFFGLPAVCPHAVVGSYPTRFGYTPGNAIELVAAIKRALQ HHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH APHQQSRQYLSWEEVVARVLDPTAYEGTKILPAV CCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA