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The map label for this gene is recN [H]

Identifier: 182681983

GI number: 182681983

Start: 1610788

End: 1612461

Strand: Direct

Name: recN [H]

Synonym: XfasM23_1458

Alternate gene names: 182681983

Gene position: 1610788-1612461 (Clockwise)

Preceding gene: 182681969

Following gene: 182681985

Centisome position: 63.52

GC content: 54.42

Gene sequence:

>1674_bases
ATGCTCAGACATCTCACGATTAAGGATTTCGCTGTTGTCCGTAACATCGAATTAGAATTCGGCCCTGGTATGACTGTGGT
CTCCGGCGAGACAGGTGCCGGCAAGTCACTGATCATTGACGCTCTGGGTTTCCTCTCCGGACTACGCGCCGACAGCAGTG
TCGTTCGCCACGGAGCTGAACGGGCCGAATTATCGGCTGAATTCGACATCACGATACACCACCATGCCCGCGTCTGGCTG
CGCAACGTAGAGCTTGACGACGGCGACCAATGCCAGCTACGTCGGATCATCCGTGCCGACGGTGGCTCGCGTGCATGGAT
CAACGCACGCCCAGTCACACTATCGCAACTAAGTGATCTCGCCACCCATCTCGTCGAGATCCACGGCCAACATGAACACC
AAACACTGCTCTCACGTCAAAGCCAGCTCGTACTACTGGACACCTACGCACAAAACGAAACCGAACGCGACGCAGTACAA
CAAGCCGCAACACATTGGCAAGCACTCCTGGACGAACGCGATGCGCTACAGGCACAAGGCGATATGTCCGAGCGAATCAA
TTTCATAGAACACCAACTGACAGAATTGCAACGCGAAAATCTGGATCCGGCCACTATCACCGCATTAGACGCCAGTCATC
GACGCCAAGCCCATACCGCTGCGCTCATCGAAGCATGTAAGAACACTACCCAGACATTACATGGCGACGACACCACCTCA
GCGTTGCATCTGCTCCATGCAGCGCGTCACACACTCAGCCGGGTCAACGAACACGATGCACGACTAGGCGAAGTTGAAAC
TTTACTAGACAACGCAATGATCCAAGTGGACGAAGCACTGACATTATTAGATCGGATTCATAACGATCTGAACATTGACC
CTGAACAATTGGAAGCCATCGAACTCAGAATCGGACGCCTACACAGCCTGGCACGCAAACATCGCTGCACACCGCTTGAC
TTAGCTGCACAGCGCGACCGTATGGCCGCCGAAGTCGAATCAATGCGCAACATGGATATACACCTGCAACAGCTGGATCA
TCGGATCAGCAACGCCATGACAAAGTGGCGGCAAGCAGCGGAAAAACTTAGCATCAGCCGCACGCGCGCTGCCGCGGCAC
TTTCAACAACCACGACAAACCTGATCAACGAATTGGGCATGGGCGGGGGACAGCTTCTGATCCAACTGCAACCACACGAA
AACAATCGACCACATCCTAACGGTGCCGAACGCACCGAATTTCTCATCGCCACCAATCCAGGCCAACCGCCACGACCGCT
ACGCAAGATTGCCTCTGGAGGTGAGTTGTCGCGCGTATCGCTGGCCATCATGGTCGCCGCACTAGGCCTGGATACAGTGC
CAACAATGGTCTTTGACGAAGTCGACACAGGCATCGGGGGCGCAATCGCCGACATCGTCGGCCAAAAACTACGCGCCTTA
GGCGAGCAACACCAAGTATTATGCGTCACTCACTTACCACAGGTCGCCGCAAAGGGACATACTCACTACCGCGTCAGCAA
GATCCCTATAGACGGCATCACGCAAAGCGCCATCTGCCTACTCGACTCACAAGCACGTCAAGAAGAAATAGCCCGCATGT
TGGGCGGCGTACACATTAGTAAAGAAGCCCATGCAGCAGCAGGCAAACTTTTACAGGAGTTACAGGAGATGTAA

Upstream 100 bases:

>100_bases
AAGGGAAACAAATAGTTTTTCGGCGGAACGTTGGCAAGATTACCCACTCCCTACCCTCTCAACTCGCCCTAAGTTTTTTG
ATTGACACTGTTCTAACGCC

Downstream 100 bases:

>100_bases
CTAACGTCGCAACAAACGAAAGGTTGCTTTACAGGTCAGGAAGGCATCCATGAAGCACTGTACATTCAAGAAAATAACTC
CGCTCCCCCTACCCTCACAC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MLRHLTIKDFAVVRNIELEFGPGMTVVSGETGAGKSLIIDALGFLSGLRADSSVVRHGAERAELSAEFDITIHHHARVWL
RNVELDDGDQCQLRRIIRADGGSRAWINARPVTLSQLSDLATHLVEIHGQHEHQTLLSRQSQLVLLDTYAQNETERDAVQ
QAATHWQALLDERDALQAQGDMSERINFIEHQLTELQRENLDPATITALDASHRRQAHTAALIEACKNTTQTLHGDDTTS
ALHLLHAARHTLSRVNEHDARLGEVETLLDNAMIQVDEALTLLDRIHNDLNIDPEQLEAIELRIGRLHSLARKHRCTPLD
LAAQRDRMAAEVESMRNMDIHLQQLDHRISNAMTKWRQAAEKLSISRTRAAAALSTTTTNLINELGMGGGQLLIQLQPHE
NNRPHPNGAERTEFLIATNPGQPPRPLRKIASGGELSRVSLAIMVAALGLDTVPTMVFDEVDTGIGGAIADIVGQKLRAL
GEQHQVLCVTHLPQVAAKGHTHYRVSKIPIDGITQSAICLLDSQARQEEIARMLGGVHISKEAHAAAGKLLQELQEM

Sequences:

>Translated_557_residues
MLRHLTIKDFAVVRNIELEFGPGMTVVSGETGAGKSLIIDALGFLSGLRADSSVVRHGAERAELSAEFDITIHHHARVWL
RNVELDDGDQCQLRRIIRADGGSRAWINARPVTLSQLSDLATHLVEIHGQHEHQTLLSRQSQLVLLDTYAQNETERDAVQ
QAATHWQALLDERDALQAQGDMSERINFIEHQLTELQRENLDPATITALDASHRRQAHTAALIEACKNTTQTLHGDDTTS
ALHLLHAARHTLSRVNEHDARLGEVETLLDNAMIQVDEALTLLDRIHNDLNIDPEQLEAIELRIGRLHSLARKHRCTPLD
LAAQRDRMAAEVESMRNMDIHLQQLDHRISNAMTKWRQAAEKLSISRTRAAAALSTTTTNLINELGMGGGQLLIQLQPHE
NNRPHPNGAERTEFLIATNPGQPPRPLRKIASGGELSRVSLAIMVAALGLDTVPTMVFDEVDTGIGGAIADIVGQKLRAL
GEQHQVLCVTHLPQVAAKGHTHYRVSKIPIDGITQSAICLLDSQARQEEIARMLGGVHISKEAHAAAGKLLQELQEM
>Mature_557_residues
MLRHLTIKDFAVVRNIELEFGPGMTVVSGETGAGKSLIIDALGFLSGLRADSSVVRHGAERAELSAEFDITIHHHARVWL
RNVELDDGDQCQLRRIIRADGGSRAWINARPVTLSQLSDLATHLVEIHGQHEHQTLLSRQSQLVLLDTYAQNETERDAVQ
QAATHWQALLDERDALQAQGDMSERINFIEHQLTELQRENLDPATITALDASHRRQAHTAALIEACKNTTQTLHGDDTTS
ALHLLHAARHTLSRVNEHDARLGEVETLLDNAMIQVDEALTLLDRIHNDLNIDPEQLEAIELRIGRLHSLARKHRCTPLD
LAAQRDRMAAEVESMRNMDIHLQQLDHRISNAMTKWRQAAEKLSISRTRAAAALSTTTTNLINELGMGGGQLLIQLQPHE
NNRPHPNGAERTEFLIATNPGQPPRPLRKIASGGELSRVSLAIMVAALGLDTVPTMVFDEVDTGIGGAIADIVGQKLRAL
GEQHQVLCVTHLPQVAAKGHTHYRVSKIPIDGITQSAICLLDSQARQEEIARMLGGVHISKEAHAAAGKLLQELQEM

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=555, Percent_Identity=38.3783783783784, Blast_Score=348, Evalue=4e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61472; Mature: 61472

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRHLTIKDFAVVRNIELEFGPGMTVVSGETGAGKSLIIDALGFLSGLRADSSVVRHGAE
CCCEEEHHHHHHHEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHH
RAELSAEFDITIHHHARVWLRNVELDDGDQCQLRRIIRADGGSRAWINARPVTLSQLSDL
HHHCCCEEEEEEEECEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
ATHLVEIHGQHEHQTLLSRQSQLVLLDTYAQNETERDAVQQAATHWQALLDERDALQAQG
HHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DMSERINFIEHQLTELQRENLDPATITALDASHRRQAHTAALIEACKNTTQTLHGDDTTS
CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ALHLLHAARHTLSRVNEHDARLGEVETLLDNAMIQVDEALTLLDRIHNDLNIDPEQLEAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ELRIGRLHSLARKHRCTPLDLAAQRDRMAAEVESMRNMDIHLQQLDHRISNAMTKWRQAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EKLSISRTRAAAALSTTTTNLINELGMGGGQLLIQLQPHENNRPHPNGAERTEFLIATNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECC
GQPPRPLRKIASGGELSRVSLAIMVAALGLDTVPTMVFDEVDTGIGGAIADIVGQKLRAL
CCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GEQHQVLCVTHLPQVAAKGHTHYRVSKIPIDGITQSAICLLDSQARQEEIARMLGGVHIS
CCCCCEEEEECCHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHCCEEEC
KEAHAAAGKLLQELQEM
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRHLTIKDFAVVRNIELEFGPGMTVVSGETGAGKSLIIDALGFLSGLRADSSVVRHGAE
CCCEEEHHHHHHHEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHH
RAELSAEFDITIHHHARVWLRNVELDDGDQCQLRRIIRADGGSRAWINARPVTLSQLSDL
HHHCCCEEEEEEEECEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
ATHLVEIHGQHEHQTLLSRQSQLVLLDTYAQNETERDAVQQAATHWQALLDERDALQAQG
HHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DMSERINFIEHQLTELQRENLDPATITALDASHRRQAHTAALIEACKNTTQTLHGDDTTS
CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ALHLLHAARHTLSRVNEHDARLGEVETLLDNAMIQVDEALTLLDRIHNDLNIDPEQLEAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ELRIGRLHSLARKHRCTPLDLAAQRDRMAAEVESMRNMDIHLQQLDHRISNAMTKWRQAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EKLSISRTRAAAALSTTTTNLINELGMGGGQLLIQLQPHENNRPHPNGAERTEFLIATNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECC
GQPPRPLRKIASGGELSRVSLAIMVAALGLDTVPTMVFDEVDTGIGGAIADIVGQKLRAL
CCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GEQHQVLCVTHLPQVAAKGHTHYRVSKIPIDGITQSAICLLDSQARQEEIARMLGGVHIS
CCCCCEEEEECCHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHCCEEEC
KEAHAAAGKLLQELQEM
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]