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The map label for this gene is omlA [H]

Identifier: 182681985

GI number: 182681985

Start: 1613127

End: 1613519

Strand: Direct

Name: omlA [H]

Synonym: XfasM23_1460

Alternate gene names: 182681985

Gene position: 1613127-1613519 (Clockwise)

Preceding gene: 182681983

Following gene: 182681988

Centisome position: 63.62

GC content: 48.35

Gene sequence:

>393_bases
ATGCGCAATCTCCTCCTAGCCGCTGCCCTTCCTCTCCTCTTTACCGCCGGTTGCAGCATCATCTACAAACAGCCAATTTA
TCAAGGCAACTTGATCAAAAAGGAAGCTGTTGACCAATTAAAAATTGGCATGAATAAACAAGAGGTCGCCATGCTGCTTG
GTACGCCGTCGATCTCCGACATATTTCACACAGACCGTTGGGACTATACATCCACACAACGTATCAACCGCGTAGCGCAC
ACTGAAATCAAGAATCTCACCGTTTACTTTCAGAACGACCTAGTCACCCGATGGGAAGGAGACTACTTCCCGAACCAAGA
TGAGAAACTGGCGGAATCGGCACGCAAGCAATTCGGTCCAAACCTCTCCAGAAAAGAACACGGTAATCGCTGA

Upstream 100 bases:

>100_bases
GATGGACCATTTAGCATCCGCGACCTCGTGAATCGGTTACGGCAACCGCATAGGAGTGTATCATCGTGCAAATATTTACC
TGTTGACTGCTAAAATTCCA

Downstream 100 bases:

>100_bases
ACAGATTCTATCGAAACGATAGACGTATTTACGCCGACACAGCACGTCGGCGCCGCGCCTCCTTAGGATCAATCAACAAA
GGACGCAACAATTCAACCCT

Product: SmpA/OmlA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRNLLLAAALPLLFTAGCSIIYKQPIYQGNLIKKEAVDQLKIGMNKQEVAMLLGTPSISDIFHTDRWDYTSTQRINRVAH
TEIKNLTVYFQNDLVTRWEGDYFPNQDEKLAESARKQFGPNLSRKEHGNR

Sequences:

>Translated_130_residues
MRNLLLAAALPLLFTAGCSIIYKQPIYQGNLIKKEAVDQLKIGMNKQEVAMLLGTPSISDIFHTDRWDYTSTQRINRVAH
TEIKNLTVYFQNDLVTRWEGDYFPNQDEKLAESARKQFGPNLSRKEHGNR
>Mature_130_residues
MRNLLLAAALPLLFTAGCSIIYKQPIYQGNLIKKEAVDQLKIGMNKQEVAMLLGTPSISDIFHTDRWDYTSTQRINRVAH
TEIKNLTVYFQNDLVTRWEGDYFPNQDEKLAESARKQFGPNLSRKEHGNR

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=98, Percent_Identity=37.7551020408163, Blast_Score=66, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 14969; Mature: 14969

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLLLAAALPLLFTAGCSIIYKQPIYQGNLIKKEAVDQLKIGMNKQEVAMLLGTPSISD
CCHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHHHHHHHCCCHHHEEHEECCCCHHH
IFHTDRWDYTSTQRINRVAHTEIKNLTVYFQNDLVTRWEGDYFPNQDEKLAESARKQFGP
HHCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCC
NLSRKEHGNR
CCCCCCCCCC
>Mature Secondary Structure
MRNLLLAAALPLLFTAGCSIIYKQPIYQGNLIKKEAVDQLKIGMNKQEVAMLLGTPSISD
CCHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHHHHHHHCCCHHHEEHEECCCCHHH
IFHTDRWDYTSTQRINRVAHTEIKNLTVYFQNDLVTRWEGDYFPNQDEKLAESARKQFGP
HHCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCC
NLSRKEHGNR
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]