Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is dgkA [H]
Identifier: 182681976
GI number: 182681976
Start: 1602625
End: 1603005
Strand: Reverse
Name: dgkA [H]
Synonym: XfasM23_1451
Alternate gene names: 182681976
Gene position: 1603005-1602625 (Counterclockwise)
Preceding gene: 182681977
Following gene: 182681975
Centisome position: 63.22
GC content: 53.28
Gene sequence:
>381_bases ATGGCTGACCAATTTGGGCACATTCCGCGTGGACCGCGGCGCATTTTCAAAGCTGCAATCTGGTCATTAAAGGGATTGCG TGCCGCTTGGTTGCACGAATCTTCTTTCCGTCTGGAGGTGGTATTGCTTCTGCTGCTTGGGCCATTGGGCCTGTGGCTGG GGCAAACCCCGGTGGAGAAGGTACTGTTGGTTGGCGGCTTATTCATGGTGTTGGTGGTGGAGTTGCTGAATTCGGCGATT GAAGCAGTGATCGAGCGTTATGGGCCTGAATACCATGAACTTGCTGGGCGTGCTAAGGATATGGGCTCGGCTGCGGTATT CATTACCTTGGGTAATGTGGTGCTTTGCTGGGTGTTGATCTTAGGTCCGCGTCTGTTTTAG
Upstream 100 bases:
>100_bases CCGATGAAGATGGCGGCGTTGTTGTGGCAGAATCGTCACCCTTCAACGGCGTGATTGGGACGATCTTTCGCGTTCCAGTT TTTTTAACTTCTGTCAAATA
Downstream 100 bases:
>100_bases TGCTTTTGCTTGTTGCAAGTTATCTAAAGGATGGCTGCACGGTGGCACAATGGGTGTTCTCGCTTTGGGGCAGGGCACGG TTCCACATGATTTATCTCCA
Product: diacylglycerol kinase
Products: NA
Alternate protein names: DAGK; Diglyceride kinase; DGK [H]
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MADQFGHIPRGPRRIFKAAIWSLKGLRAAWLHESSFRLEVVLLLLLGPLGLWLGQTPVEKVLLVGGLFMVLVVELLNSAI EAVIERYGPEYHELAGRAKDMGSAAVFITLGNVVLCWVLILGPRLF
Sequences:
>Translated_126_residues MADQFGHIPRGPRRIFKAAIWSLKGLRAAWLHESSFRLEVVLLLLLGPLGLWLGQTPVEKVLLVGGLFMVLVVELLNSAI EAVIERYGPEYHELAGRAKDMGSAAVFITLGNVVLCWVLILGPRLF >Mature_125_residues ADQFGHIPRGPRRIFKAAIWSLKGLRAAWLHESSFRLEVVLLLLLGPLGLWLGQTPVEKVLLVGGLFMVLVVELLNSAIE AVIERYGPEYHELAGRAKDMGSAAVFITLGNVVLCWVLILGPRLF
Specific function: Recycling of diacylglycerol produced during the turnover of membrane phospholipid [H]
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790475, Length=113, Percent_Identity=52.212389380531, Blast_Score=118, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 13931; Mature: 13800
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQFGHIPRGPRRIFKAAIWSLKGLRAAWLHESSFRLEVVLLLLLGPLGLWLGQTPVEK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHH VLLVGGLFMVLVVELLNSAIEAVIERYGPEYHELAGRAKDMGSAAVFITLGNVVLCWVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LGPRLF HCCCCC >Mature Secondary Structure ADQFGHIPRGPRRIFKAAIWSLKGLRAAWLHESSFRLEVVLLLLLGPLGLWLGQTPVEK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHH VLLVGGLFMVLVVELLNSAIEAVIERYGPEYHELAGRAKDMGSAAVFITLGNVVLCWVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LGPRLF HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]