Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is pheA [H]
Identifier: 182681967
GI number: 182681967
Start: 1592479
End: 1593603
Strand: Reverse
Name: pheA [H]
Synonym: XfasM23_1442
Alternate gene names: 182681967
Gene position: 1593603-1592479 (Counterclockwise)
Preceding gene: 182681968
Following gene: 182681966
Centisome position: 62.85
GC content: 49.87
Gene sequence:
>1125_bases ATGACTAAGCCGGTTAATACTACTGCTGACAAGGTTGCTCTGTCTGACACGGCATTGGCCGATATCCGCACTAAAATCGA TAAGATTGACCGTGATATTCAGACATTGATTGCCGAACGTGCGTGTTATGCCCAGCAAGTCGGTCAGGCAAAAAGCAAAC TTGCCGCTGCGATGGATTACTACCGCCCCGAGCGTGAAGCGCAGGTGCTACGTATGGTGGTGGAACGCAATGAAGGTCCG TTGTCAGATGAAGTGCTAGTCCGCTTATTCCGTGAAATTATGTCTGCCTGTTTAGCCCAGCAGGAACCATTGAAGATTGG TTACCTTGGTCCGGAAGGCACCTTTAGCCAACAAGCAGTGCTCAAACACTTTGGCCATTATGTCCTTGGCGAGCCTATGG CCAGTATTGAGGAGGTGTTCCAGGAGGTCGAGGCCGGTCATACCGATTTCGGAGTAGTGCCGGTGGAGAATTCAGGTCAT GGAACAATCCAGGTTACGCTGGATTTGTTTTTGAATTCTAAATTGAAAATCTGTGGCGAGATTGAGTTGCGCGTGCATCA ATATCTGATGTCTCGTAGTGGTCGCCTTGAAGACATTCATCGGATCTATGCGCACCCGCAGTCGTTTGCGCAGACCGCCT GTTGGCTACGTGCCAATCTGCCTCATGTTGAGAAAATCCCTGTGTCTAGCAACGCCGAAGGTGCACGTCGTGCCTCCAAT GCTAACGATGCAGCTTCGATCGGTAGCGAGAGCGCCGCGCGAGTGTATGCGTTGAGCAAGGTGTTCATACACTCAATTGA AGATGAGCAGGACAATACAACGCGTTTTCTGGTGATCGGTCGTCGGATATTTGCGCCTTCCGGATGCGATCGTACTTCGA TTCTTGTGTTTATTCGTGACAACCCTGGCGCATTGTTTGAAGTGCTTGGTTCATTTGCGCGTCACGGTATCAACATGAAT CGTATTGAATCGCGCCCTTCCCATCAGGTCAGATGGGAGTATGTCTTTTTTATTGATTTGCTTGGCCATGTTGAGGATGA ACCGATGAAACAGGCACTGGCTGAATTGGAGCAACATGCGGTGAAGGTCAAGATCCTCGGAGCCTATCCAATTGCCCTTC TATGA
Upstream 100 bases:
>100_bases TTTCAACAGCGCTATGGTTGATTCTGGCGCCCATACCACACCGTTTGAGCGGTGATGACGATGAGGCATTTTTGCTCGTG ACTACCAAGCTGGTTTCCAA
Downstream 100 bases:
>100_bases TGCTTGAGTATTTCTGTCCAGGAGCGACACGCATTACCGCAGCCTCGGCGGTTTGTATTGTCGTCGCTCTCAGTTGAAGA AACCTAGTATGAGTCATAGA
Product: chorismate mutase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTKPVNTTADKVALSDTALADIRTKIDKIDRDIQTLIAERACYAQQVGQAKSKLAAAMDYYRPEREAQVLRMVVERNEGP LSDEVLVRLFREIMSACLAQQEPLKIGYLGPEGTFSQQAVLKHFGHYVLGEPMASIEEVFQEVEAGHTDFGVVPVENSGH GTIQVTLDLFLNSKLKICGEIELRVHQYLMSRSGRLEDIHRIYAHPQSFAQTACWLRANLPHVEKIPVSSNAEGARRASN ANDAASIGSESAARVYALSKVFIHSIEDEQDNTTRFLVIGRRIFAPSGCDRTSILVFIRDNPGALFEVLGSFARHGINMN RIESRPSHQVRWEYVFFIDLLGHVEDEPMKQALAELEQHAVKVKILGAYPIALL
Sequences:
>Translated_374_residues MTKPVNTTADKVALSDTALADIRTKIDKIDRDIQTLIAERACYAQQVGQAKSKLAAAMDYYRPEREAQVLRMVVERNEGP LSDEVLVRLFREIMSACLAQQEPLKIGYLGPEGTFSQQAVLKHFGHYVLGEPMASIEEVFQEVEAGHTDFGVVPVENSGH GTIQVTLDLFLNSKLKICGEIELRVHQYLMSRSGRLEDIHRIYAHPQSFAQTACWLRANLPHVEKIPVSSNAEGARRASN ANDAASIGSESAARVYALSKVFIHSIEDEQDNTTRFLVIGRRIFAPSGCDRTSILVFIRDNPGALFEVLGSFARHGINMN RIESRPSHQVRWEYVFFIDLLGHVEDEPMKQALAELEQHAVKVKILGAYPIALL >Mature_373_residues TKPVNTTADKVALSDTALADIRTKIDKIDRDIQTLIAERACYAQQVGQAKSKLAAAMDYYRPEREAQVLRMVVERNEGPL SDEVLVRLFREIMSACLAQQEPLKIGYLGPEGTFSQQAVLKHFGHYVLGEPMASIEEVFQEVEAGHTDFGVVPVENSGHG TIQVTLDLFLNSKLKICGEIELRVHQYLMSRSGRLEDIHRIYAHPQSFAQTACWLRANLPHVEKIPVSSNAEGARRASNA NDAASIGSESAARVYALSKVFIHSIEDEQDNTTRFLVIGRRIFAPSGCDRTSILVFIRDNPGALFEVLGSFARHGINMNR IESRPSHQVRWEYVFFIDLLGHVEDEPMKQALAELEQHAVKVKILGAYPIALL
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=384, Percent_Identity=30.7291666666667, Blast_Score=169, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6324013, Length=340, Percent_Identity=30, Blast_Score=124, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010957 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01842 ACT; PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 41765; Mature: 41634
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPVNTTADKVALSDTALADIRTKIDKIDRDIQTLIAERACYAQQVGQAKSKLAAAMDY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRPEREAQVLRMVVERNEGPLSDEVLVRLFREIMSACLAQQEPLKIGYLGPEGTFSQQAV HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHH LKHFGHYVLGEPMASIEEVFQEVEAGHTDFGVVPVENSGHGTIQVTLDLFLNSKLKICGE HHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEEEECCCCEEEEHH IELRVHQYLMSRSGRLEDIHRIYAHPQSFAQTACWLRANLPHVEKIPVSSNAEGARRASN HHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHCCC ANDAASIGSESAARVYALSKVFIHSIEDEQDNTTRFLVIGRRIFAPSGCDRTSILVFIRD CCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEECCCCCCCCEEEEEEEC NPGALFEVLGSFARHGINMNRIESRPSHQVRWEYVFFIDLLGHVEDEPMKQALAELEQHA CCCHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHCC VKVKILGAYPIALL EEEEEEECCCHHCC >Mature Secondary Structure TKPVNTTADKVALSDTALADIRTKIDKIDRDIQTLIAERACYAQQVGQAKSKLAAAMDY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRPEREAQVLRMVVERNEGPLSDEVLVRLFREIMSACLAQQEPLKIGYLGPEGTFSQQAV HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHH LKHFGHYVLGEPMASIEEVFQEVEAGHTDFGVVPVENSGHGTIQVTLDLFLNSKLKICGE HHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEEEECCCCEEEEHH IELRVHQYLMSRSGRLEDIHRIYAHPQSFAQTACWLRANLPHVEKIPVSSNAEGARRASN HHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHCCC ANDAASIGSESAARVYALSKVFIHSIEDEQDNTTRFLVIGRRIFAPSGCDRTSILVFIRD CCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEECCCCCCCCEEEEEEEC NPGALFEVLGSFARHGINMNRIESRPSHQVRWEYVFFIDLLGHVEDEPMKQALAELEQHA CCCHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHCC VKVKILGAYPIALL EEEEEEECCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1919506; 10368439 [H]