Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is mrp [H]
Identifier: 182681947
GI number: 182681947
Start: 1577379
End: 1578290
Strand: Reverse
Name: mrp [H]
Synonym: XfasM23_1420
Alternate gene names: 182681947
Gene position: 1578290-1577379 (Counterclockwise)
Preceding gene: 182681950
Following gene: 182681945
Centisome position: 62.24
GC content: 54.5
Gene sequence:
>912_bases ATGAGCGAAGATGGCGGCGTCACCACCGATGAGCGCGCTTGTGCTGCGCCCCTGCAATTGAGTAACACATTTCCCCGAGT CAGCCGCCACGCTGTCCAAACTGGTCTCTCTCCACATCCACGCGTGCGTAATGTCATTGCGGTTGGTTCGGGCAAGGGTG GGGTAGGCAAGTCAACGATTGCGGTCAATCTAGCTGTTGCGTTGCAGCGGACGGGTGTTCGGGTGGGGCTGCTGGATGCA GATATTTACGGGCCGAGTGTGCCGGCGATGCTGGGTTTAAGTGGGCGTCCGGAGAGTCCAGACAATAAATTGATTGAGCC ATTGCGTGCATTTGGAATTGAGGCAATGTCGATCGGGCTGCTGATTGATGTTGATACCCCGATGATTTGGCGCGGTCCAA TGGCCACCTCTGCGCTGACTCAATTGTTCAATGACACTTTGTGGGGTGATCTTGACTATCTGTTGATTGATTTGCCGCCG GGCACTGGTGATATCCAACTGACCTTATCGCAGAAGATTCCTGTGGCAGGTGCTGTCATTGTGACCACACCCCAGGACAT TGCCACGCTGGATGCGCGTAAAGCGCTGAAAATGTTTGAAAAGGTGAATGTACCGGTCCTTGGTATCGTCGAGAATATGG CGATGCACTGTTGCCGACAATGTGGACATGTGGAACATCTGTTTGGTGAAGGAGGCGCGCAGCGGATGGCAGAGCACTAC CATGTGCCATTGCTTGGGTCATTGCCATTGGACATTGTAATTCGCGAGCATGGTGATTTGGGTCAGCCGATTACGGTTGC TGCACCTAAAGGGAGCGTTGGGCAAGCCTATGCTGCTGTTGCTGCCTGTCTGGCGGCGGAATTGGCCAAGCGTCCGCGTG CTGCGATTCCGATGACCACAACATTGGGTTGA
Upstream 100 bases:
>100_bases ATTGCTGATATATACGTATGGAATGTGGTTGAGCAGGCCATCATGTGGTGCCATGCGATGTTGTATCGCGGGCAGGCTGC CTCTTGGCTGAATCCTGCGA
Downstream 100 bases:
>100_bases GCGGTGCGGCAATATGCTGTGTTGCTGAAAACAGTAATGTCTGCAATAGGCTCACTTTCTTGGTGCGTTGCTGAAGTGCG TTTTACTTTATTTAGTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSEDGGVTTDERACAAPLQLSNTFPRVSRHAVQTGLSPHPRVRNVIAVGSGKGGVGKSTIAVNLAVALQRTGVRVGLLDA DIYGPSVPAMLGLSGRPESPDNKLIEPLRAFGIEAMSIGLLIDVDTPMIWRGPMATSALTQLFNDTLWGDLDYLLIDLPP GTGDIQLTLSQKIPVAGAVIVTTPQDIATLDARKALKMFEKVNVPVLGIVENMAMHCCRQCGHVEHLFGEGGAQRMAEHY HVPLLGSLPLDIVIREHGDLGQPITVAAPKGSVGQAYAAVAACLAAELAKRPRAAIPMTTTLG
Sequences:
>Translated_303_residues MSEDGGVTTDERACAAPLQLSNTFPRVSRHAVQTGLSPHPRVRNVIAVGSGKGGVGKSTIAVNLAVALQRTGVRVGLLDA DIYGPSVPAMLGLSGRPESPDNKLIEPLRAFGIEAMSIGLLIDVDTPMIWRGPMATSALTQLFNDTLWGDLDYLLIDLPP GTGDIQLTLSQKIPVAGAVIVTTPQDIATLDARKALKMFEKVNVPVLGIVENMAMHCCRQCGHVEHLFGEGGAQRMAEHY HVPLLGSLPLDIVIREHGDLGQPITVAAPKGSVGQAYAAVAACLAAELAKRPRAAIPMTTTLG >Mature_302_residues SEDGGVTTDERACAAPLQLSNTFPRVSRHAVQTGLSPHPRVRNVIAVGSGKGGVGKSTIAVNLAVALQRTGVRVGLLDAD IYGPSVPAMLGLSGRPESPDNKLIEPLRAFGIEAMSIGLLIDVDTPMIWRGPMATSALTQLFNDTLWGDLDYLLIDLPPG TGDIQLTLSQKIPVAGAVIVTTPQDIATLDARKALKMFEKVNVPVLGIVENMAMHCCRQCGHVEHLFGEGGAQRMAEHYH VPLLGSLPLDIVIREHGDLGQPITVAAPKGSVGQAYAAVAACLAAELAKRPRAAIPMTTTLG
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=249, Percent_Identity=49.7991967871486, Blast_Score=252, Evalue=3e-67, Organism=Homo sapiens, GI6912540, Length=217, Percent_Identity=43.3179723502304, Blast_Score=174, Evalue=8e-44, Organism=Homo sapiens, GI118572611, Length=247, Percent_Identity=38.8663967611336, Blast_Score=173, Evalue=2e-43, Organism=Escherichia coli, GI87082045, Length=277, Percent_Identity=54.5126353790614, Blast_Score=295, Evalue=2e-81, Organism=Caenorhabditis elegans, GI25143050, Length=261, Percent_Identity=38.3141762452107, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6322188, Length=219, Percent_Identity=39.2694063926941, Blast_Score=181, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6321347, Length=251, Percent_Identity=35.0597609561753, Blast_Score=143, Evalue=4e-35, Organism=Drosophila melanogaster, GI221511043, Length=249, Percent_Identity=40.9638554216867, Blast_Score=204, Evalue=6e-53, Organism=Drosophila melanogaster, GI24667611, Length=218, Percent_Identity=43.5779816513761, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI19921440, Length=239, Percent_Identity=39.3305439330544, Blast_Score=141, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 31879; Mature: 31748
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDGGVTTDERACAAPLQLSNTFPRVSRHAVQTGLSPHPRVRNVIAVGSGKGGVGKSTI CCCCCCCCCCCHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEE AVNLAVALQRTGVRVGLLDADIYGPSVPAMLGLSGRPESPDNKLIEPLRAFGIEAMSIGL EEEEEEEEECCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE LIDVDTPMIWRGPMATSALTQLFNDTLWGDLDYLLIDLPPGTGDIQLTLSQKIPVAGAVI EEECCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEE VTTPQDIATLDARKALKMFEKVNVPVLGIVENMAMHCCRQCGHVEHLFGEGGAQRMAEHY EECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHC HVPLLGSLPLDIVIREHGDLGQPITVAAPKGSVGQAYAAVAACLAAELAKRPRAAIPMTT CCCEECCCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE TLG CCC >Mature Secondary Structure SEDGGVTTDERACAAPLQLSNTFPRVSRHAVQTGLSPHPRVRNVIAVGSGKGGVGKSTI CCCCCCCCCCHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEE AVNLAVALQRTGVRVGLLDADIYGPSVPAMLGLSGRPESPDNKLIEPLRAFGIEAMSIGL EEEEEEEEECCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE LIDVDTPMIWRGPMATSALTQLFNDTLWGDLDYLLIDLPPGTGDIQLTLSQKIPVAGAVI EEECCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEE VTTPQDIATLDARKALKMFEKVNVPVLGIVENMAMHCCRQCGHVEHLFGEGGAQRMAEHY EECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHC HVPLLGSLPLDIVIREHGDLGQPITVAAPKGSVGQAYAAVAACLAAELAKRPRAAIPMTT CCCEECCCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE TLG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]