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The map label for this gene is yhdJ [C]

Identifier: 182681950

GI number: 182681950

Start: 1579946

End: 1580659

Strand: Reverse

Name: yhdJ [C]

Synonym: XfasM23_1423

Alternate gene names: 182681950

Gene position: 1580659-1579946 (Counterclockwise)

Preceding gene: 182681953

Following gene: 182681947

Centisome position: 62.34

GC content: 57.0

Gene sequence:

>714_bases
ATGATTGTTGCGTCATCTGCTGCGTACAGGCTGCACGAAGGCGACGCACTGCGACTGCTTTGCGACATAGACAGCGCAAG
CGTGGACGCGGTGATTACCGATCCGCCGTACTGTTCCGGTGCGATGCGGATGGCGGATCGCTTCAAGCCCACGAAAAGAA
AATATATCAACAACGGCACGAAACACGTTGCCCCTGATTTTGATTGCGACTTCCGCGACCACCGAGGTTTTTTAGCGTGG
TCCAGCCAATGGCTTTCAGAGTGTCGCCGCGTCACGCGCCCTGGTGGTGTGCTTTTAGTGTTTACTGATTGGCGGATGCT
GCCAACGCTCACCGATGCCGTACAGAGTGCAGGCTGGGCGTGGCAGGGCATTGTGGTATGGGATAAAACGCCTGCATGTC
GTCCCCAGCTAGGCCGGTTCCGCAGCCAAGCTGAATTTATCGTCTGGGCGTCCTGCGGCCTGATGAATCCCAAAGCGCAT
CCGGTCACGCCGGTAGGCGTTTTTTCTACCGGCACAGCCGCCCGTGAAAAGCGGCACCAAGTGGGGAAGCCGTTAGCGCT
TATGGAGCATCTGGTAAAGATCGTCCCCCCTGCCTCTACGGTCCTTGATCCATTTGCAGGCAGCGGCACAACCGGCGTTG
CCGCCTTGCGTGCAGGACATCGGTTTATTGGGATGGTTATTGGGATGGAGATGTCGCGTTTTAAGTACGTGTGA

Upstream 100 bases:

>100_bases
TCTTATGATAATTCCATTATAAAACAATAAGTTATAATGGCCACATCCTGCTAGATGTATTGATAGACTATCATTCATAT
ATTTTAGGCACTAAAACCTT

Downstream 100 bases:

>100_bases
GTCGTGCCAAGCTGCGTTGTGCAGCCGTGTCAATCAACTGCCACACATGTTCGAAGTCTTTCGCGTTACCAAGGTATGGA
TCCGGTATTTCGCGTTCCTG

Product: DNA methylase N-4/N-6 domain-containing protein

Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]

Alternate protein names: DNA Methylase N-4/N-6 Domain-Containing Protein; Site-Specific DNA-Methyltransferase; DNA Methylase; Adenine Specific DNA Methyltransferase; DNA-Methyltransferase; Prophage DNA Adenine Methylase; Adenine-Specific Methyltransferase; Methylase; DNA-Methyltransferase Protein; Adenine-Specific DNA-Methyltransferase; Prophage; Adenine Specific DNA Methylase; Methylase HinfI; Site-Specific DNA Methyltransferase; Methylase DpnIIB

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIVASSAAYRLHEGDALRLLCDIDSASVDAVITDPPYCSGAMRMADRFKPTKRKYINNGTKHVAPDFDCDFRDHRGFLAW
SSQWLSECRRVTRPGGVLLVFTDWRMLPTLTDAVQSAGWAWQGIVVWDKTPACRPQLGRFRSQAEFIVWASCGLMNPKAH
PVTPVGVFSTGTAAREKRHQVGKPLALMEHLVKIVPPASTVLDPFAGSGTTGVAALRAGHRFIGMVIGMEMSRFKYV

Sequences:

>Translated_237_residues
MIVASSAAYRLHEGDALRLLCDIDSASVDAVITDPPYCSGAMRMADRFKPTKRKYINNGTKHVAPDFDCDFRDHRGFLAW
SSQWLSECRRVTRPGGVLLVFTDWRMLPTLTDAVQSAGWAWQGIVVWDKTPACRPQLGRFRSQAEFIVWASCGLMNPKAH
PVTPVGVFSTGTAAREKRHQVGKPLALMEHLVKIVPPASTVLDPFAGSGTTGVAALRAGHRFIGMVIGMEMSRFKYV
>Mature_237_residues
MIVASSAAYRLHEGDALRLLCDIDSASVDAVITDPPYCSGAMRMADRFKPTKRKYINNGTKHVAPDFDCDFRDHRGFLAW
SSQWLSECRRVTRPGGVLLVFTDWRMLPTLTDAVQSAGWAWQGIVVWDKTPACRPQLGRFRSQAEFIVWASCGLMNPKAH
PVTPVGVFSTGTAAREKRHQVGKPLALMEHLVKIVPPASTVLDPFAGSGTTGVAALRAGHRFIGMVIGMEMSRFKYV

Specific function: Unknown

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.72 [C]

Molecular weight: Translated: 26163; Mature: 26163

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVASSAAYRLHEGDALRLLCDIDSASVDAVITDPPYCSGAMRMADRFKPTKRKYINNGT
CEEECCCCEEECCCCEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHCCHHHHHHHCCCC
KHVAPDFDCDFRDHRGFLAWSSQWLSECRRVTRPGGVLLVFTDWRMLPTLTDAVQSAGWA
CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCE
WQGIVVWDKTPACRPQLGRFRSQAEFIVWASCGLMNPKAHPVTPVGVFSTGTAAREKRHQ
EEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHH
VGKPLALMEHLVKIVPPASTVLDPFAGSGTTGVAALRAGHRFIGMVIGMEMSRFKYV
HCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure
MIVASSAAYRLHEGDALRLLCDIDSASVDAVITDPPYCSGAMRMADRFKPTKRKYINNGT
CEEECCCCEEECCCCEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHCCHHHHHHHCCCC
KHVAPDFDCDFRDHRGFLAWSSQWLSECRRVTRPGGVLLVFTDWRMLPTLTDAVQSAGWA
CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCE
WQGIVVWDKTPACRPQLGRFRSQAEFIVWASCGLMNPKAHPVTPVGVFSTGTAAREKRHQ
EEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHH
VGKPLALMEHLVKIVPPASTVLDPFAGSGTTGVAALRAGHRFIGMVIGMEMSRFKYV
HCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]

Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA