| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681915
Identifier: 182681915
GI number: 182681915
Start: 1533636
End: 1534103
Strand: Direct
Name: 182681915
Synonym: XfasM23_1383
Alternate gene names: NA
Gene position: 1533636-1534103 (Clockwise)
Preceding gene: 182681914
Following gene: 182681916
Centisome position: 60.48
GC content: 30.34
Gene sequence:
>468_bases ATGAAGAAAAAATTCTCATTAAAAAGAAAAATTCCGGTCATCATATTTTTTATCACGGCCACCATCTCCTATTTCATGAT AATATCAAATGAAACAAAAGTTGGTGTCGACTATCAAGCGGATGCTATTTCAAAATCTACCCTACAGACACTCGTATCTA TGTCATGGGCGAAAGGAAAAGATTTAGATTTTTCAATGAAAAGCTTAAGCAACTCTTTAAGTCAACATATATTATCCAAT CAATGCACATCAGAAAAATGCTTAGAAAAACTTGGTTTTAATAAATGCACCCATTCCGAAGAAAAAATAAAATGCGAATA TAAAGCTAAAGTATTATTAGTAAACAATGATTATTCACACAGCAATAAGAAGGAAGATGAAGTCATCATCAACATTGAAT CCAACTTATCTGAAAATAAATTAACTTCCTCAATACATCATTACGAAAATGCACGACCTTTTAATTAA
Upstream 100 bases:
>100_bases TCATTAACAGAGATCATCATCTCAAAATGAATATTAATTACGGAACATTAGAGTTGCTTGAAGTGAATATTTTCACACAT TCAGAATGGAAGAAAGAGCC
Downstream 100 bases:
>100_bases CCCATGGAAGCTAGCCAATAAGAACTAAAATTTCATGGGTATTTATTGAAATTCAATCAAAAAACCACCCTACGCAAAAT AAATCTACATTAAATCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKKKFSLKRKIPVIIFFITATISYFMIISNETKVGVDYQADAISKSTLQTLVSMSWAKGKDLDFSMKSLSNSLSQHILSN QCTSEKCLEKLGFNKCTHSEEKIKCEYKAKVLLVNNDYSHSNKKEDEVIINIESNLSENKLTSSIHHYENARPFN
Sequences:
>Translated_155_residues MKKKFSLKRKIPVIIFFITATISYFMIISNETKVGVDYQADAISKSTLQTLVSMSWAKGKDLDFSMKSLSNSLSQHILSN QCTSEKCLEKLGFNKCTHSEEKIKCEYKAKVLLVNNDYSHSNKKEDEVIINIESNLSENKLTSSIHHYENARPFN >Mature_155_residues MKKKFSLKRKIPVIIFFITATISYFMIISNETKVGVDYQADAISKSTLQTLVSMSWAKGKDLDFSMKSLSNSLSQHILSN QCTSEKCLEKLGFNKCTHSEEKIKCEYKAKVLLVNNDYSHSNKKEDEVIINIESNLSENKLTSSIHHYENARPFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17721; Mature: 17721
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKFSLKRKIPVIIFFITATISYFMIISNETKVGVDYQADAISKSTLQTLVSMSWAKGK CCCCCCCCCCCCEEEHHHHHHHHEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCC DLDFSMKSLSNSLSQHILSNQCTSEKCLEKLGFNKCTHSEEKIKCEYKAKVLLVNNDYSH CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHEEEEEEEEEEEEECCCCC SNKKEDEVIINIESNLSENKLTSSIHHYENARPFN CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKKFSLKRKIPVIIFFITATISYFMIISNETKVGVDYQADAISKSTLQTLVSMSWAKGK CCCCCCCCCCCCEEEHHHHHHHHEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCC DLDFSMKSLSNSLSQHILSNQCTSEKCLEKLGFNKCTHSEEKIKCEYKAKVLLVNNDYSH CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHEEEEEEEEEEEEECCCCC SNKKEDEVIINIESNLSENKLTSSIHHYENARPFN CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA