Click here to switch to the map view.

The map label for this gene is yebN [C]

Identifier: 182681914

GI number: 182681914

Start: 1532670

End: 1533254

Strand: Direct

Name: yebN [C]

Synonym: XfasM23_1382

Alternate gene names: 182681914

Gene position: 1532670-1533254 (Clockwise)

Preceding gene: 182681913

Following gene: 182681915

Centisome position: 60.44

GC content: 52.14

Gene sequence:

>585_bases
ATGTCCCCTATTACAACCCTATTAATCGGTATTGCAATGTCGACAGACGCTTTTGCCGCTGCAATCGGCAAAGGTGCGGC
AATTGGTAAACCCCGCCTGCGCGATGCACTGTACGTTGCGGTGATTTTCGGCGTGATCGAAACCGCCACTCCAATCGCAG
GTTGGCTACTTGGTCAAGTTGCATCGCACTATATCGCCACCTTCGATCACTGGATCGCCTTCGGCCTCCTCGGCGGCCTG
GGTATACACATGATCGTTAACGGACTCAAAAACAATGGCAACACCTGCAAAGACAATGCAGATACCCACAATCGTAACAG
TAGATGGCTGACCCTAGCCGCCACGGCTCTAGCAACCAGCATTGATGCAGCCGCAATTGGAATCAGTATGGCGTTCCTGG
ATATACATATTGGCATCGTCGCCGCGGTAATCGGCCTATGCACATTCACCATGGTGATCTTCGGTGTAATGCTAGGGCGT
GTCCTAGGCACATTTGTAGGCAACCGTGCTGAGATTGTCGGCGGCATCATCCTCATCATCGTCGGCAGCACCATCCTGTA
CGAACATCTAAGCAACACTGGTTAA

Upstream 100 bases:

>100_bases
GCAACCATCGTGGTTTGGCGAGACCAACGGCTCGTGTACGCAATGCTGGTTGGGCGTGAACACGGACCGTTGCTCAGCGC
CCGACCCACGAGAAATCCCC

Downstream 100 bases:

>100_bases
GATTGGTATTCAATACATAAAAAACCATACCAATCTAAAGATATACCCCACCAATATTACTCAAGCTTATTAATTCAATT
TATTTAATTATTTTTAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSPITTLLIGIAMSTDAFAAAIGKGAAIGKPRLRDALYVAVIFGVIETATPIAGWLLGQVASHYIATFDHWIAFGLLGGL
GIHMIVNGLKNNGNTCKDNADTHNRNSRWLTLAATALATSIDAAAIGISMAFLDIHIGIVAAVIGLCTFTMVIFGVMLGR
VLGTFVGNRAEIVGGIILIIVGSTILYEHLSNTG

Sequences:

>Translated_194_residues
MSPITTLLIGIAMSTDAFAAAIGKGAAIGKPRLRDALYVAVIFGVIETATPIAGWLLGQVASHYIATFDHWIAFGLLGGL
GIHMIVNGLKNNGNTCKDNADTHNRNSRWLTLAATALATSIDAAAIGISMAFLDIHIGIVAAVIGLCTFTMVIFGVMLGR
VLGTFVGNRAEIVGGIILIIVGSTILYEHLSNTG
>Mature_193_residues
SPITTLLIGIAMSTDAFAAAIGKGAAIGKPRLRDALYVAVIFGVIETATPIAGWLLGQVASHYIATFDHWIAFGLLGGLG
IHMIVNGLKNNGNTCKDNADTHNRNSRWLTLAATALATSIDAAAIGISMAFLDIHIGIVAAVIGLCTFTMVIFGVMLGRV
LGTFVGNRAEIVGGIILIIVGSTILYEHLSNTG

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0059 family

Homologues:

Organism=Escherichia coli, GI87081981, Length=190, Percent_Identity=43.1578947368421, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1297_XYLFT (Q87BZ9)

Other databases:

- EMBL:   AE009442
- RefSeq:   NP_779497.1
- STRING:   Q87BZ9
- GeneID:   1144019
- GenomeReviews:   AE009442_GR
- KEGG:   xft:PD1297
- eggNOG:   COG1971
- HOGENOM:   HBG709685
- OMA:   WDHWVAF
- ProtClustDB:   CLSK376246
- BioCyc:   XFAS183190:PD_1297-MONOMER
- HAMAP:   MF_01521
- InterPro:   IPR003810
- InterPro:   IPR022929

Pfam domain/function: PF02659 DUF204

EC number: NA

Molecular weight: Translated: 20175; Mature: 20044

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x14501cfc)-; HASH(0x14e034a4)-; HASH(0x13fd0718)-; HASH(0x151dcc50)-; HASH(0x1591314c)-; HASH(0x1516ba80)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPITTLLIGIAMSTDAFAAAIGKGAAIGKPRLRDALYVAVIFGVIETATPIAGWLLGQV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASHYIATFDHWIAFGLLGGLGIHMIVNGLKNNGNTCKDNADTHNRNSRWLTLAATALATS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH
IDAAAIGISMAFLDIHIGIVAAVIGLCTFTMVIFGVMLGRVLGTFVGNRAEIVGGIILII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VGSTILYEHLSNTG
HHHHHHHHHHHCCH
>Mature Secondary Structure 
SPITTLLIGIAMSTDAFAAAIGKGAAIGKPRLRDALYVAVIFGVIETATPIAGWLLGQV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASHYIATFDHWIAFGLLGGLGIHMIVNGLKNNGNTCKDNADTHNRNSRWLTLAATALATS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH
IDAAAIGISMAFLDIHIGIVAAVIGLCTFTMVIFGVMLGRVLGTFVGNRAEIVGGIILII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VGSTILYEHLSNTG
HHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478