| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is nadD
Identifier: 182681847
GI number: 182681847
Start: 1445701
End: 1446369
Strand: Direct
Name: nadD
Synonym: XfasM23_1312
Alternate gene names: 182681847
Gene position: 1445701-1446369 (Clockwise)
Preceding gene: 182681846
Following gene: 182681848
Centisome position: 57.01
GC content: 57.4
Gene sequence:
>669_bases ATGCCCAGCCTGCACGTATTTTATGGCGGCACCTTTGATCCTGTGCATGTCGGCCACTTAGCCATCGCACGCGCAGCGCA TGCAGCACTGCAAGCCCCTATCGCCCTGATCCCCTCCGCCGATCCCCCACATCGCCCCACACCCGGCTCCTCAAGCATGG ATCGCTTACGCATGCTGCAACTGGCAGTCTCCAAGGAACCTGGATTGTCCGCAGACCCACGCGAACTACAACGCGCCGCG CGACAAAACCGATCATCGTACACCGTCGACACCCTGACCGAAGTGCGCAGCGAACTCGGCCCCAAAACATCAATTATCTG GTTACTGGGTGCTGACGCCTTCGTCAACCTGAGCAACTGGAAAGATTGGCAAATGCTACCGGAACTCACACACCTGGTCA TCGCCAACCGCCCAGGCATCACACTGCAAACACAACTGCCACCCAAGATGGCTACCGTCTTCAATCATCGCTGGGTCCAA GATCCAGCCACACTACGCAAGACACCACACGGCCATCTCTGGCTATTGAACCAACACCCAAACCCAAGCTCAGCAAGCAA AGTACGCGCTGCTATCAGCGCCGCCGCCCACTGGGAAGCCGACCTCACACCTGAAGTCGCACAGTACATACGCACACACG GCCTATACGGCATCCATGACATCAATTAA
Upstream 100 bases:
>100_bases ATGCCTGGCTGTCACTCGAACGTCTCATGGTGGCAGTAGCAGAAGCAGATGCAACACGTCTGCTAGCATAACGCCCCCTT CCTGGACACCGAGCGATGCT
Downstream 100 bases:
>100_bases CCACAAGCTTATCTATAATGCCTCCCCCAACGTTCACTCGAGTTACCACGTTGACCAATCAAGCGCATCTCATCAAAACC ACAATCCCCAACCCACCACC
Product: nicotinic acid mononucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MPSLHVFYGGTFDPVHVGHLAIARAAHAALQAPIALIPSADPPHRPTPGSSSMDRLRMLQLAVSKEPGLSADPRELQRAA RQNRSSYTVDTLTEVRSELGPKTSIIWLLGADAFVNLSNWKDWQMLPELTHLVIANRPGITLQTQLPPKMATVFNHRWVQ DPATLRKTPHGHLWLLNQHPNPSSASKVRAAISAAAHWEADLTPEVAQYIRTHGLYGIHDIN
Sequences:
>Translated_222_residues MPSLHVFYGGTFDPVHVGHLAIARAAHAALQAPIALIPSADPPHRPTPGSSSMDRLRMLQLAVSKEPGLSADPRELQRAA RQNRSSYTVDTLTEVRSELGPKTSIIWLLGADAFVNLSNWKDWQMLPELTHLVIANRPGITLQTQLPPKMATVFNHRWVQ DPATLRKTPHGHLWLLNQHPNPSSASKVRAAISAAAHWEADLTPEVAQYIRTHGLYGIHDIN >Mature_221_residues PSLHVFYGGTFDPVHVGHLAIARAAHAALQAPIALIPSADPPHRPTPGSSSMDRLRMLQLAVSKEPGLSADPRELQRAAR QNRSSYTVDTLTEVRSELGPKTSIIWLLGADAFVNLSNWKDWQMLPELTHLVIANRPGITLQTQLPPKMATVFNHRWVQD PATLRKTPHGHLWLLNQHPNPSSASKVRAAISAAAHWEADLTPEVAQYIRTHGLYGIHDIN
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family
Homologues:
Organism=Escherichia coli, GI1786858, Length=223, Percent_Identity=34.9775784753363, Blast_Score=125, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NADD_XYLF2 (B2I5T8)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830007.1 - ProteinModelPortal: B2I5T8 - SMR: B2I5T8 - GeneID: 6203827 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1312 - HOGENOM: HBG739448 - OMA: IQCAPAG - ProtClustDB: PRK00071 - HAMAP: MF_00244 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR12039 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR00482
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.18
Molecular weight: Translated: 24510; Mature: 24379
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLHVFYGGTFDPVHVGHLAIARAAHAALQAPIALIPSADPPHRPTPGSSSMDRLRMLQ CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHH LAVSKEPGLSADPRELQRAARQNRSSYTVDTLTEVRSELGPKTSIIWLLGADAFVNLSNW HHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEECCCC KDWQMLPELTHLVIANRPGITLQTQLPPKMATVFNHRWVQDPATLRKTPHGHLWLLNQHP CCHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCC NPSSASKVRAAISAAAHWEADLTPEVAQYIRTHGLYGIHDIN CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCC >Mature Secondary Structure PSLHVFYGGTFDPVHVGHLAIARAAHAALQAPIALIPSADPPHRPTPGSSSMDRLRMLQ CCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHH LAVSKEPGLSADPRELQRAARQNRSSYTVDTLTEVRSELGPKTSIIWLLGADAFVNLSNW HHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEECCCC KDWQMLPELTHLVIANRPGITLQTQLPPKMATVFNHRWVQDPATLRKTPHGHLWLLNQHP CCHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCC NPSSASKVRAAISAAAHWEADLTPEVAQYIRTHGLYGIHDIN CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA