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The map label for this gene is 182681845

Identifier: 182681845

GI number: 182681845

Start: 1444021

End: 1444629

Strand: Direct

Name: 182681845

Synonym: XfasM23_1310

Alternate gene names: NA

Gene position: 1444021-1444629 (Clockwise)

Preceding gene: 182681844

Following gene: 182681846

Centisome position: 56.95

GC content: 53.2

Gene sequence:

>609_bases
ATGATCAAATTACTTACTCCTTTCGCTGCCCTCGCTCTGATCGCTGGGCTCACTGGCTGCGACTTTCATCTGCGTAACAA
ACTAAACCTGCCTGGCAACCTTCCCCAATCCCCCAACACGAACCTAAACCTTCCACCTAATGTGCCCGCGTTATTGATCC
AGTCCAGTATCAAATACAGCGAACTAGAGAAATTCGTGCGGCGTGGCCTCCATGCCTCAGGCGTCGTCATCGTTGACGAC
CCAACGGCCACCGGCATCGCACAGCTGAAGATCCTCTCCGAAAGCTGGGGAGATTTACCCACTGCAATCGACATCCAGGG
ACGCGCACAAGAATACAGCCTACGCTACGCGGCAATTTTCACTATGATTGATGGCAATGGAGAAGTGGTCGTGCCACAAC
AAGTCATCGAACTATCGCGCGACTACCTCTCCCCCCCAGTTGATGCAACAGGAACCACCACCGAACGCGAGATTTTGGCT
AACGAACTGCGCCGCGATATGTCCGCCTCAATCCTGCGTCGTATCGATAGCGTCATCCGTTCACGTCTTGAAAAGAGAGA
ACTATTAGAACAAGCAAAACCACCCTCACCTGCAACCTCCGGCGCCTGA

Upstream 100 bases:

>100_bases
TGCCCGCTGAACCGATCGCATCTTAAGTACTGTTCACACCCACCGCATGACACTAACACTCTGTCCCATATCGGCATCTC
CTCCAAGAGAGTCTCTGAAA

Downstream 100 bases:

>100_bases
TCAAGGCATCATGGAACTTCGCCCAGAGCAACTCGCCAACCTGCCTGCCAATCAACCCTTAGAGCCTGCCTACCTCATCG
CCGGCCCCGAAACCCTACGC

Product: rare lipoprotein B

Products: NA

Alternate protein names: Rare Lipoprotein B Family Protein; Rare Lipoprotein B Family; Rare Lipoprotein B

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MIKLLTPFAALALIAGLTGCDFHLRNKLNLPGNLPQSPNTNLNLPPNVPALLIQSSIKYSELEKFVRRGLHASGVVIVDD
PTATGIAQLKILSESWGDLPTAIDIQGRAQEYSLRYAAIFTMIDGNGEVVVPQQVIELSRDYLSPPVDATGTTTEREILA
NELRRDMSASILRRIDSVIRSRLEKRELLEQAKPPSPATSGA

Sequences:

>Translated_202_residues
MIKLLTPFAALALIAGLTGCDFHLRNKLNLPGNLPQSPNTNLNLPPNVPALLIQSSIKYSELEKFVRRGLHASGVVIVDD
PTATGIAQLKILSESWGDLPTAIDIQGRAQEYSLRYAAIFTMIDGNGEVVVPQQVIELSRDYLSPPVDATGTTTEREILA
NELRRDMSASILRRIDSVIRSRLEKRELLEQAKPPSPATSGA
>Mature_202_residues
MIKLLTPFAALALIAGLTGCDFHLRNKLNLPGNLPQSPNTNLNLPPNVPALLIQSSIKYSELEKFVRRGLHASGVVIVDD
PTATGIAQLKILSESWGDLPTAIDIQGRAQEYSLRYAAIFTMIDGNGEVVVPQQVIELSRDYLSPPVDATGTTTEREILA
NELRRDMSASILRRIDSVIRSRLEKRELLEQAKPPSPATSGA

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22037; Mature: 22037

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLLTPFAALALIAGLTGCDFHLRNKLNLPGNLPQSPNTNLNLPPNVPALLIQSSIKYS
CCEEHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHH
ELEKFVRRGLHASGVVIVDDPTATGIAQLKILSESWGDLPTAIDIQGRAQEYSLRYAAIF
HHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHEEEEEE
TMIDGNGEVVVPQQVIELSRDYLSPPVDATGTTTEREILANELRRDMSASILRRIDSVIR
EEECCCCCEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLEKRELLEQAKPPSPATSGA
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIKLLTPFAALALIAGLTGCDFHLRNKLNLPGNLPQSPNTNLNLPPNVPALLIQSSIKYS
CCEEHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHH
ELEKFVRRGLHASGVVIVDDPTATGIAQLKILSESWGDLPTAIDIQGRAQEYSLRYAAIF
HHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHEEEEEE
TMIDGNGEVVVPQQVIELSRDYLSPPVDATGTTTEREILANELRRDMSASILRRIDSVIR
EEECCCCCEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLEKRELLEQAKPPSPATSGA
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA