| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is pstC [H]
Identifier: 182681818
GI number: 182681818
Start: 1414921
End: 1415895
Strand: Direct
Name: pstC [H]
Synonym: XfasM23_1283
Alternate gene names: 182681818
Gene position: 1414921-1415895 (Clockwise)
Preceding gene: 182681817
Following gene: 182681819
Centisome position: 55.8
GC content: 53.03
Gene sequence:
>975_bases ATGACTTCGACTCTCATTCCAAAGGAGACTTCTACTCCTGGTGGACGTGATCTGCGCGATGCAAGAGCCGATTATTTTTT TAAGCTATTGCTGACCGCCGCTGTCGCCTTCGTTTTAATCGCTTTAGTCAGTGCAGCGCTATCTATGCTGTGGGGAGGAC GCCAAGCACTGCAACTGCAAGGCGTCAGCTTTTTCTATAGCACGGAATGGAACCCCGTAGAAAACAAATACGGGGCATTG ACGCCGATCTACGGCACCATCGTCACTGCACTGATTGCGATGCTGATCGCCATGCCCGTGAGCTTGGGGATCGCTTTTTT CCTCACCGAAGTCGCACCGCGTTGGCTTCGCACACCCATTGGCACTGCAATCGAGTTATTGGCTGGTATCCCATCAATTA TCTACGGCATGTGGGGCCTGTTTGTACTCGTACCGGTGATGACCGACTACATCACCCCGTTCCTTAATGATCACATCGGC ACGCTGCCACTGATCGGCACGCTGTTTCAAGGACCGCCGCTCGGAATCGGCACGCTGACCGCTGGCTTTGTGTTGGCAAT CATGGTGATTCCCTTCATCTCCTCAATGATGCGCGAGGTGTTCCTGACTGTACCGACGCAACTGAAGGAGTCAGCATACG CACTGGGTTCAACCAAGTGGGAGGTGAGTTGGAACATTGTACTTCCCTACACTAGATCAGCAGTCATCGGTGGCATGTTT CTCGGCCTAGGCCGTGCACTCGGCGAAACCATGGCGGTCGCTTTCGTCATCGGCAACAGCGTACGTTTATCCCCTTCGTT GCTGACACCAGGAACCACAATTGCTGCACTGATTGCTAACGATTTCGGCGAGGCCACAGAAACTTACCGTTCGGCATTGC TCTTGCTCGGCTTCGTACTTTTTATCGTTACCTTCGCCGTATTGGTGATCGCTCGCCTCATGTTACTGCGTCTATCACGA AAGGAGGGCAACTGA
Upstream 100 bases:
>100_bases TCCACACGCATTAAGAATTTTGCTTGGTACGTTATCCGTACAGCGTAACAGCTATGGCGCATCTCACTCCTCCAAGCCAC AGGTAACACACCGATCTGCA
Downstream 100 bases:
>100_bases TGTCCACAGCATCGCAACATCTGTACAAGCGCCGCCGACTGATCAATGCTGCCGCCATCACGATCTCTTGTATCGCCGCA CTGTTCGGCCTTTTCTTCCT
Product: phosphate ABC transporter inner membrane protein PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTSTLIPKETSTPGGRDLRDARADYFFKLLLTAAVAFVLIALVSAALSMLWGGRQALQLQGVSFFYSTEWNPVENKYGAL TPIYGTIVTALIAMLIAMPVSLGIAFFLTEVAPRWLRTPIGTAIELLAGIPSIIYGMWGLFVLVPVMTDYITPFLNDHIG TLPLIGTLFQGPPLGIGTLTAGFVLAIMVIPFISSMMREVFLTVPTQLKESAYALGSTKWEVSWNIVLPYTRSAVIGGMF LGLGRALGETMAVAFVIGNSVRLSPSLLTPGTTIAALIANDFGEATETYRSALLLLGFVLFIVTFAVLVIARLMLLRLSR KEGN
Sequences:
>Translated_324_residues MTSTLIPKETSTPGGRDLRDARADYFFKLLLTAAVAFVLIALVSAALSMLWGGRQALQLQGVSFFYSTEWNPVENKYGAL TPIYGTIVTALIAMLIAMPVSLGIAFFLTEVAPRWLRTPIGTAIELLAGIPSIIYGMWGLFVLVPVMTDYITPFLNDHIG TLPLIGTLFQGPPLGIGTLTAGFVLAIMVIPFISSMMREVFLTVPTQLKESAYALGSTKWEVSWNIVLPYTRSAVIGGMF LGLGRALGETMAVAFVIGNSVRLSPSLLTPGTTIAALIANDFGEATETYRSALLLLGFVLFIVTFAVLVIARLMLLRLSR KEGN >Mature_323_residues TSTLIPKETSTPGGRDLRDARADYFFKLLLTAAVAFVLIALVSAALSMLWGGRQALQLQGVSFFYSTEWNPVENKYGALT PIYGTIVTALIAMLIAMPVSLGIAFFLTEVAPRWLRTPIGTAIELLAGIPSIIYGMWGLFVLVPVMTDYITPFLNDHIGT LPLIGTLFQGPPLGIGTLTAGFVLAIMVIPFISSMMREVFLTVPTQLKESAYALGSTKWEVSWNIVLPYTRSAVIGGMFL GLGRALGETMAVAFVIGNSVRLSPSLLTPGTTIAALIANDFGEATETYRSALLLLGFVLFIVTFAVLVIARLMLLRLSRK EGN
Specific function: Part of a binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=318, Percent_Identity=48.7421383647799, Blast_Score=304, Evalue=4e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34976; Mature: 34845
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTLIPKETSTPGGRDLRDARADYFFKLLLTAAVAFVLIALVSAALSMLWGGRQALQLQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEE GVSFFYSTEWNPVENKYGALTPIYGTIVTALIAMLIAMPVSLGIAFFLTEVAPRWLRTPI CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH GTAIELLAGIPSIIYGMWGLFVLVPVMTDYITPFLNDHIGTLPLIGTLFQGPPLGIGTLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHH AGFVLAIMVIPFISSMMREVFLTVPTQLKESAYALGSTKWEVSWNIVLPYTRSAVIGGMF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHH LGLGRALGETMAVAFVIGNSVRLSPSLLTPGTTIAALIANDFGEATETYRSALLLLGFVL HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIVTFAVLVIARLMLLRLSRKEGN HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSTLIPKETSTPGGRDLRDARADYFFKLLLTAAVAFVLIALVSAALSMLWGGRQALQLQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEE GVSFFYSTEWNPVENKYGALTPIYGTIVTALIAMLIAMPVSLGIAFFLTEVAPRWLRTPI CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH GTAIELLAGIPSIIYGMWGLFVLVPVMTDYITPFLNDHIGTLPLIGTLFQGPPLGIGTLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHH AGFVLAIMVIPFISSMMREVFLTVPTQLKESAYALGSTKWEVSWNIVLPYTRSAVIGGMF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHH LGLGRALGETMAVAFVIGNSVRLSPSLLTPGTTIAALIANDFGEATETYRSALLLLGFVL HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIVTFAVLVIARLMLLRLSRKEGN HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]