Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

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The map label for this gene is pstS [H]

Identifier: 182681817

GI number: 182681817

Start: 1413715

End: 1414809

Strand: Direct

Name: pstS [H]

Synonym: XfasM23_1282

Alternate gene names: 182681817

Gene position: 1413715-1414809 (Clockwise)

Preceding gene: 182681816

Following gene: 182681818

Centisome position: 55.75

GC content: 49.41

Gene sequence:

>1095_bases
ATGAAAGTACATTTTGCTGGTTTCACTCTCCTTTGTTTATGCACTGCCGTAACAATCACCGGCTGTAAACCTTCCAACGA
TAACCAGTCAACAGGCGTCAGTCAGGATGCGAACAGTACGACGCCCCCCTCTGCCGAGCAAACCAAGAGTGTGAAGATTT
CAGGCGCAGGTGCCTCATTTATATATCCACTGATCTCGCAATGGTCAGCCGACTACAACGCCGCCACTGGCAATAAAATT
AACTATCAGTCAATCGGCTCAGGCGGTGGTATTGCCCAAATCAAAGCCGCCACAATCGATTTTGGTTCTTCTGACAAGCC
ACTTGACAGCAGCGAACTGACCAAAGCGGGTCTAGGGCAGTTTCCATCGGCCATAGGCGGCGTCGTGCCGGTGGTCAATC
TAGACAACATCGAACCAGGCAAACTACGCCTTACAGGCCCCCTGCTTGCAGATATTTTCCTGGGGAAGATCAGTAAGTGG
AATGACGCAGCAATCATCAGCGCCAATCCGGGGTTACATCTTCCCGACACTAAAATCAACATCGTGCATCGTTCCGATGG
CTCTGGCACGACATTCAATTTCAGCAACTATCTATCAAAAGTCAGCGCGGAATGGAAACAGAAAGTGGGTGAAGGCACTT
CAGTGCAGTGGCCCGGAGGCGTCGGCGGTAAAGGCAACGAAGGTGTAGCCTCATATGTTCAACAGATTAAAGGCTCGATC
GGCTACGTTGAACTGGCGTATGCGCTTCAGAACAAAATGTCATATACAGCACTCCAGAACGCTGCTGGTCAATGGGTACA
ACCAAGCGCAGAAAGCTTTGCAGCCGCCGCATCCAACGCAGACTGGAGCAATGCAAAGGATTTCAATTTGGTCATCACCA
ACGCTACTGGGGAAGGCGCTTGGCCAATCACAGCCACAAACTTTATATTGATGCCCAAGCAAACTAAGGATGCAGCGCAA
AGAAAAGCCACTCTAGACTTCTTCAAGTGGTGCTTTGAAAATGGGCAGAAACAAGCCAATGAATTACACTACGTGCCATT
GCCACCAAATCTGGTGAAGCAAATCGAAGCTTATTGGGCAAGCGAATTCAAGTAA

Upstream 100 bases:

>100_bases
CACAATGTCACCGATTTGAAATAAAAATATCATTTCATGTCGCTACCTTTTGGCACTTTAACTAGCAATTTTAATTAAAT
TAGGAACAATCGGAGTTTTC

Downstream 100 bases:

>100_bases
TGTGTTACGCATCCACACGCATTAAGAATTTTGCTTGGTACGTTATCCGTACAGCGTAACAGCTATGGCGCATCTCACTC
CTCCAAGCCACAGGTAACAC

Product: phosphate ABC transporter periplasmic phosphate-binding protein

Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]

Alternate protein names: PBP [H]

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKVHFAGFTLLCLCTAVTITGCKPSNDNQSTGVSQDANSTTPPSAEQTKSVKISGAGASFIYPLISQWSADYNAATGNKI
NYQSIGSGGGIAQIKAATIDFGSSDKPLDSSELTKAGLGQFPSAIGGVVPVVNLDNIEPGKLRLTGPLLADIFLGKISKW
NDAAIISANPGLHLPDTKINIVHRSDGSGTTFNFSNYLSKVSAEWKQKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSI
GYVELAYALQNKMSYTALQNAAGQWVQPSAESFAAAASNADWSNAKDFNLVITNATGEGAWPITATNFILMPKQTKDAAQ
RKATLDFFKWCFENGQKQANELHYVPLPPNLVKQIEAYWASEFK

Sequences:

>Translated_364_residues
MKVHFAGFTLLCLCTAVTITGCKPSNDNQSTGVSQDANSTTPPSAEQTKSVKISGAGASFIYPLISQWSADYNAATGNKI
NYQSIGSGGGIAQIKAATIDFGSSDKPLDSSELTKAGLGQFPSAIGGVVPVVNLDNIEPGKLRLTGPLLADIFLGKISKW
NDAAIISANPGLHLPDTKINIVHRSDGSGTTFNFSNYLSKVSAEWKQKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSI
GYVELAYALQNKMSYTALQNAAGQWVQPSAESFAAAASNADWSNAKDFNLVITNATGEGAWPITATNFILMPKQTKDAAQ
RKATLDFFKWCFENGQKQANELHYVPLPPNLVKQIEAYWASEFK
>Mature_364_residues
MKVHFAGFTLLCLCTAVTITGCKPSNDNQSTGVSQDANSTTPPSAEQTKSVKISGAGASFIYPLISQWSADYNAATGNKI
NYQSIGSGGGIAQIKAATIDFGSSDKPLDSSELTKAGLGQFPSAIGGVVPVVNLDNIEPGKLRLTGPLLADIFLGKISKW
NDAAIISANPGLHLPDTKINIVHRSDGSGTTFNFSNYLSKVSAEWKQKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSI
GYVELAYALQNKMSYTALQNAAGQWVQPSAESFAAAASNADWSNAKDFNLVITNATGEGAWPITATNFILMPKQTKDAAQ
RKATLDFFKWCFENGQKQANELHYVPLPPNLVKQIEAYWASEFK

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

Organism=Escherichia coli, GI2367271, Length=312, Percent_Identity=51.9230769230769, Blast_Score=331, Evalue=4e-92,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005673
- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 38668; Mature: 38668

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVHFAGFTLLCLCTAVTITGCKPSNDNQSTGVSQDANSTTPPSAEQTKSVKISGAGASF
CEEEECHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHH
IYPLISQWSADYNAATGNKINYQSIGSGGGIAQIKAATIDFGSSDKPLDSSELTKAGLGQ
HHHHHHHHCCCCCCCCCCEEEHEECCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHC
FPSAIGGVVPVVNLDNIEPGKLRLTGPLLADIFLGKISKWNDAAIISANPGLHLPDTKIN
CHHHHCCCEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEE
IVHRSDGSGTTFNFSNYLSKVSAEWKQKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSI
EEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCCCC
GYVELAYALQNKMSYTALQNAAGQWVQPSAESFAAAASNADWSNAKDFNLVITNATGEGA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
WPITATNFILMPKQTKDAAQRKATLDFFKWCFENGQKQANELHYVPLPPNLVKQIEAYWA
CCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCHHHHHHHHHHHH
SEFK
HCCC
>Mature Secondary Structure
MKVHFAGFTLLCLCTAVTITGCKPSNDNQSTGVSQDANSTTPPSAEQTKSVKISGAGASF
CEEEECHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHH
IYPLISQWSADYNAATGNKINYQSIGSGGGIAQIKAATIDFGSSDKPLDSSELTKAGLGQ
HHHHHHHHCCCCCCCCCCEEEHEECCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHC
FPSAIGGVVPVVNLDNIEPGKLRLTGPLLADIFLGKISKWNDAAIISANPGLHLPDTKIN
CHHHHCCCEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEE
IVHRSDGSGTTFNFSNYLSKVSAEWKQKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSI
EEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCCCC
GYVELAYALQNKMSYTALQNAAGQWVQPSAESFAAAASNADWSNAKDFNLVITNATGEGA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
WPITATNFILMPKQTKDAAQRKATLDFFKWCFENGQKQANELHYVPLPPNLVKQIEAYWA
CCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCHHHHHHHHHHHH
SEFK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; phosphate [Periplasm]; H2O [C]

Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]