Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is dinD [H]
Identifier: 182681666
GI number: 182681666
Start: 1273180
End: 1273740
Strand: Direct
Name: dinD [H]
Synonym: XfasM23_1124
Alternate gene names: 182681666
Gene position: 1273180-1273740 (Clockwise)
Preceding gene: 182681661
Following gene: 182681667
Centisome position: 50.21
GC content: 51.34
Gene sequence:
>561_bases ATGGGGGCGTGTAGTCGGTTAGGGCTTGACCCAACGGAAGCTTTCGTTCGTGAGGAAATCGTGCAAGATGGCAAAGCAAT CAAGACGTATCAGTTGAGCCGCTTCGCATGTCTTCTTGTGTCCATGACCGCAGACTCAAAAAAACCTGAAGTGGCTCGGG CGAAGACAATTCTTGCTGCCATCGCTAACACGCTAATTGAACAACGCATTCAGTCGGAAGACTTGGCACGTCTCGAAACC CGCGAAGATCTTAAGTTCGGCGAGAAGGCAATGACTAGCGCGGCGAAAGATGGCGGACTACAAAATGCCGAGTTTGGAAT CTTCAAGGATGCTGGCTTCCGCGGCATGTATAACATGAGCCTACGGGAGTTGCAGCACTATAAACGCCTACCGAACGGCA AGACGCTGTACGACTTCATGGGCTTAGAAGAGCTGGCAGGTAACCTATTCCGCGTGACACAAACAGCGGCCCGCATCAGA AATAAGGATGTGATAAGGACTACAACCACTCTCAAGCACTGCCCAACAGGTCGGTACAGAGGTTCGACGCATGATGATTG A
Upstream 100 bases:
>100_bases TGGCCAAGAAGGCGAAACCCGTTTTTGGTACGCCCACCAACTCATGCAATGGTTGGGCTACGAATCATGGCAAGCATTCT AAAACGTCATCACCAAGGCG
Downstream 100 bases:
>100_bases AAACAGCGGCGCAGGGCCAGAGCATCTTGCGCTAGAAGAGGACGTCAAAGGAGTGCAAAAACGGCTGAAAAACGTGGATA AAGCGATGAAGAAGCTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MGACSRLGLDPTEAFVREEIVQDGKAIKTYQLSRFACLLVSMTADSKKPEVARAKTILAAIANTLIEQRIQSEDLARLET REDLKFGEKAMTSAAKDGGLQNAEFGIFKDAGFRGMYNMSLRELQHYKRLPNGKTLYDFMGLEELAGNLFRVTQTAARIR NKDVIRTTTTLKHCPTGRYRGSTHDD
Sequences:
>Translated_186_residues MGACSRLGLDPTEAFVREEIVQDGKAIKTYQLSRFACLLVSMTADSKKPEVARAKTILAAIANTLIEQRIQSEDLARLET REDLKFGEKAMTSAAKDGGLQNAEFGIFKDAGFRGMYNMSLRELQHYKRLPNGKTLYDFMGLEELAGNLFRVTQTAARIR NKDVIRTTTTLKHCPTGRYRGSTHDD >Mature_185_residues GACSRLGLDPTEAFVREEIVQDGKAIKTYQLSRFACLLVSMTADSKKPEVARAKTILAAIANTLIEQRIQSEDLARLETR EDLKFGEKAMTSAAKDGGLQNAEFGIFKDAGFRGMYNMSLRELQHYKRLPNGKTLYDFMGLEELAGNLFRVTQTAARIRN KDVIRTTTTLKHCPTGRYRGSTHDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082303, Length=168, Percent_Identity=32.7380952380952, Blast_Score=78, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20826; Mature: 20695
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGACSRLGLDPTEAFVREEIVQDGKAIKTYQLSRFACLLVSMTADSKKPEVARAKTILAA CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IANTLIEQRIQSEDLARLETREDLKFGEKAMTSAAKDGGLQNAEFGIFKDAGFRGMYNMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHH LRELQHYKRLPNGKTLYDFMGLEELAGNLFRVTQTAARIRNKDVIRTTTTLKHCPTGRYR HHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC GSTHDD CCCCCC >Mature Secondary Structure GACSRLGLDPTEAFVREEIVQDGKAIKTYQLSRFACLLVSMTADSKKPEVARAKTILAA CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IANTLIEQRIQSEDLARLETREDLKFGEKAMTSAAKDGGLQNAEFGIFKDAGFRGMYNMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHH LRELQHYKRLPNGKTLYDFMGLEELAGNLFRVTQTAARIRNKDVIRTTTTLKHCPTGRYR HHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC GSTHDD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2664418; 7686882; 9278503; 2158980; 1925027; 8195095; 8057377; 8002613 [H]