Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681661
Identifier: 182681661
GI number: 182681661
Start: 1269055
End: 1269378
Strand: Direct
Name: 182681661
Synonym: XfasM23_1119
Alternate gene names: NA
Gene position: 1269055-1269378 (Clockwise)
Preceding gene: 182681660
Following gene: 182681666
Centisome position: 50.05
GC content: 52.78
Gene sequence:
>324_bases ATGATTTCACGACAGCTCGGGCCATCAGGCCGTCCGGACAGTGATACCGGCGACACCAATAGCGGTCGGTTTATCGCCTG CCGTAGCGGGTTTTACGATCCAGCGATCTTTTCGCCTGGCCGTGAAGTGACTTTCATTGGAAAAATCGAGAGCTACGAAA ATAAGTACATCGGCGAATACGATTACAAACTCCCTAAAGTTAGCGCCGATGTGATCTATTTATGGCCAGTCATACGTCAT GTTGAGGTTGTCCCCATCTATCCGTATGGCCCTTGGGGACCACCGGGGCCATGGGGCTGGAACTATCCTCGCTGGTGGTG GTGA
Upstream 100 bases:
>100_bases ACCAAGTGACTCTGTCACCAATCCCCAAATCGGTAGTTTGGTCCGATGGGGCGGAAAGATTATCAAAACCATACCCTCCC ATAGCCAGACTTGCTTCGAA
Downstream 100 bases:
>100_bases AGGGAGCTACCCACTCCAGAGCAAGATACGCGCCGCTGACCACCAAGGCGGCGCATGTTTCAAGCATTACCACGACGTTC CCAATGGCGCGCCAGCAAGT
Product: outer membrane lipoprotein Slp
Products: NA
Alternate protein names: Outer Membrane Lipoprotein Slp Family; Outer Membrane Lipoprotein; Outer Membrane Lipoprotein Slp
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MISRQLGPSGRPDSDTGDTNSGRFIACRSGFYDPAIFSPGREVTFIGKIESYENKYIGEYDYKLPKVSADVIYLWPVIRH VEVVPIYPYGPWGPPGPWGWNYPRWWW
Sequences:
>Translated_107_residues MISRQLGPSGRPDSDTGDTNSGRFIACRSGFYDPAIFSPGREVTFIGKIESYENKYIGEYDYKLPKVSADVIYLWPVIRH VEVVPIYPYGPWGPPGPWGWNYPRWWW >Mature_107_residues MISRQLGPSGRPDSDTGDTNSGRFIACRSGFYDPAIFSPGREVTFIGKIESYENKYIGEYDYKLPKVSADVIYLWPVIRH VEVVPIYPYGPWGPPGPWGWNYPRWWW
Specific function: Unknown
COG id: COG3065
COG function: function code M; Starvation-inducible outer membrane lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12375; Mature: 12375
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRQLGPSGRPDSDTGDTNSGRFIACRSGFYDPAIFSPGREVTFIGKIESYENKYIGEY CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEECCCCCEEEEECCCCCCCCCCCCC DYKLPKVSADVIYLWPVIRHVEVVPIYPYGPWGPPGPWGWNYPRWWW CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MISRQLGPSGRPDSDTGDTNSGRFIACRSGFYDPAIFSPGREVTFIGKIESYENKYIGEY CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEECCCCCEEEEECCCCCCCCCCCCC DYKLPKVSADVIYLWPVIRHVEVVPIYPYGPWGPPGPWGWNYPRWWW CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA