Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681639
Identifier: 182681639
GI number: 182681639
Start: 1242061
End: 1242525
Strand: Direct
Name: 182681639
Synonym: XfasM23_1097
Alternate gene names: NA
Gene position: 1242061-1242525 (Clockwise)
Preceding gene: 182681638
Following gene: 182681642
Centisome position: 48.98
GC content: 49.25
Gene sequence:
>465_bases ATGAAGCGATGGTTACCACTGCTCCTAATTGTGTTAATCCTTCAGGCGCAAGCGCTAAACCTTCCTTATGACGAGCATGC CGATGCCTGGACTCAGGTCAAAAAAGCGTTAGCTGCTGGCAAGCGTACACACAAACCAACCCTCTTAGTTTTCGGTGCCA ACTGGTGCACCGACTGTCGAGCACTCGATAAATCATTGCGTAACCAAAAGAACACGGCGCTGATTGCAAAGCACTTTGAA GTGGTCAAGATCGACGTGGGCAATTTTGACCGCAATTTGGAGTTAAGTCAGGCCTATGGCGACCCAATCCAGGATGGCAT TCCGGCAGTAGTTGTGGTGAATTCGGATGGCAAAGTGCGCTACACCACAAAGGGTGGAGAGTTGGCAAACGCACGCAAAA TGAGTGACCAAGGAATATATGATTTCTTTGCCAAGATTACGGAGACAAGGGGGGTATCCCACTGA
Upstream 100 bases:
>100_bases GTTCACTCGCTCTCATTGATCCTTGCAATCTGTGTTGACCAACACACCAACAAGATTAGAAGATGCAGGATATCCATAGT CTGTTACTAGAGTTCCGTTC
Downstream 100 bases:
>100_bases ATATCTATGACGGTTCCAAGAGAAGTGGAACATGACATCGTATGATAAATGACTTATTTGCTTCGATCACAGGATTCCTG TTGCACTCACCCTCACCACC
Product: putative thiol-disulfide isomerase and thioredoxin
Products: NA
Alternate protein names: Thiol-Disulfide Isomerase; Disulphide Isomerase; Thioredoxin Family Homolog; Thioredoxin Domain; Protein Disulfide Isomerase
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKRWLPLLLIVLILQAQALNLPYDEHADAWTQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFE VVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKITETRGVSH
Sequences:
>Translated_154_residues MKRWLPLLLIVLILQAQALNLPYDEHADAWTQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFE VVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKITETRGVSH >Mature_154_residues MKRWLPLLLIVLILQAQALNLPYDEHADAWTQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFE VVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKITETRGVSH
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17177; Mature: 17177
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRWLPLLLIVLILQAQALNLPYDEHADAWTQVKKALAAGKRTHKPTLLVFGANWCTDCR CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH ALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVR HHHHHHHCCCCCEEEEECEEEEEEECCCCCCCEEHHHHCCCCCCCCCCEEEEECCCCCEE YTTKGGELANARKMSDQGIYDFFAKITETRGVSH EEECCCCCCHHHHCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRWLPLLLIVLILQAQALNLPYDEHADAWTQVKKALAAGKRTHKPTLLVFGANWCTDCR CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH ALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVR HHHHHHHCCCCCEEEEECEEEEEEECCCCCCCEEHHHHCCCCCCCCCCEEEEECCCCCEE YTTKGGELANARKMSDQGIYDFFAKITETRGVSH EEECCCCCCHHHHCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA