Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681628
Identifier: 182681628
GI number: 182681628
Start: 1230429
End: 1230719
Strand: Direct
Name: 182681628
Synonym: XfasM23_1086
Alternate gene names: NA
Gene position: 1230429-1230719 (Clockwise)
Preceding gene: 182681627
Following gene: 182681629
Centisome position: 48.52
GC content: 60.14
Gene sequence:
>291_bases ATGCCGGAATTACGCGTTGACCAGATCGGCCAGCACCGCCCCATAGGTTTCGTCGCAAATGTGCCAAGTTTGCAGCCAAG CCAGTTTGGCGTAGATGGTGTCGGGGCAGGATTCTGCCATCTTGGTCTAGCCCAACTTGATCACATCGGCCAGGATCGTG CTCAGCAGCAGGGTCTTGTCCTTGACCTGGTCGCCCGATTTCAGGTGCGCGAAGTGAGGAGTGTGGCCACGGCCAGCGGC AATTCGCTGGCCTGCTTGAGGCTGGTGAATGTCGCGGGCGGCACCGGGTAG
Upstream 100 bases:
>100_bases TGCTGCCGTATTTCAGGTTGCTGCGGCCCCTTGCGCCAGTGCGGAAGTTCTGGCCGTCCGATAATGACGGGGTGCCGTCG CCCCAGTGTTCGGCGAATGC
Downstream 100 bases:
>100_bases TCCTCAAAGTCATTGAATTGGTGCGAGCCTTGCACCCAGATGTTGCCGCAGCGCAGCGAATTCAGTTATGACAGCGCGCA CAGCTCCGAGTAACCTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MPELRVDQIGQHRPIGFVANVPSLQPSQFGVDGVGAGFCHLGLAQLDHIGQDRAQQQGLVLDLVARFQVREVRSVATASG NSLACLRLVNVAGGTG
Sequences:
>Translated_96_residues MPELRVDQIGQHRPIGFVANVPSLQPSQFGVDGVGAGFCHLGLAQLDHIGQDRAQQQGLVLDLVARFQVREVRSVATASG NSLACLRLVNVAGGTG >Mature_95_residues PELRVDQIGQHRPIGFVANVPSLQPSQFGVDGVGAGFCHLGLAQLDHIGQDRAQQQGLVLDLVARFQVREVRSVATASGN SLACLRLVNVAGGTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10088; Mature: 9956
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELRVDQIGQHRPIGFVANVPSLQPSQFGVDGVGAGFCHLGLAQLDHIGQDRAQQQGLV CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCHH LDLVARFQVREVRSVATASGNSLACLRLVNVAGGTG HHHHHHHHHHHHHHHHHCCCCCEEEHHEEECCCCCC >Mature Secondary Structure PELRVDQIGQHRPIGFVANVPSLQPSQFGVDGVGAGFCHLGLAQLDHIGQDRAQQQGLV CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCHH LDLVARFQVREVRSVATASGNSLACLRLVNVAGGTG HHHHHHHHHHHHHHHHHCCCCCEEEHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA