| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681611
Identifier: 182681611
GI number: 182681611
Start: 1218089
End: 1218625
Strand: Direct
Name: 182681611
Synonym: XfasM23_1069
Alternate gene names: NA
Gene position: 1218089-1218625 (Clockwise)
Preceding gene: 182681608
Following gene: 182681612
Centisome position: 48.04
GC content: 51.77
Gene sequence:
>537_bases ATGACATTAAACGTTAGCGAGCAAGCCCAGCCCCAGGCCCGCCCACCCGTATCAGAAACTAAAAAAGAGATTGCTGCTGC TTGGGCTGTATGCGAAGCCGCTAGAAAAGAAGTGCGTGATGCTTTATATGACTGCGAAGACGCTGCTAGGGACGCGTATG AGGCACGCGAAGCCGCTGAAGAAGGAGCGCGTGATGCTGCTTTTGCTTTATACGACGCTGATAAAAAACAAGAAGCGTTT GGTGCTGCTATGGCTGTTGCGCGTGCCGCTTGGGCCTCCTACGAAGCCGCCGAAGAAGAAGCGTTTGATGAGGTTCGTAG TGAATCCGGAGCGGTTATAACAGAATCACATGCTGCGTACATAGCCGCTAGAGAAAAAGCCAGTGCTGCCTTTGCGGCGT ACTACGCCGTTAAAGACGAAAAAGCGCGTGATACCAATATTGTTATTAATGCTATTCGTGATGCTTTTTATGCCGCCGAC CTTGCTGCATACGAAGCCACTGAAGCTGCCGCTGAAAGCATGGGGGTGGCCGCATGA
Upstream 100 bases:
>100_bases TTTTTACCTATGGGTATTGACATTATTTATACCCACGGGTAATTTATCTCCATCGCCCCACGACACCCGTAACCAGCGGC AGGGGCCAGGAGATATCGAA
Downstream 100 bases:
>100_bases GCACCATATACCCCAACACAATCTTCGCCCTGGAATGGGGGAGATATACCCAAATCAGAGACGAAACCGGTAAGCACATC ATCACGCAAGATGAGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTLNVSEQAQPQARPPVSETKKEIAAAWAVCEAARKEVRDALYDCEDAARDAYEAREAAEEGARDAAFALYDADKKQEAF GAAMAVARAAWASYEAAEEEAFDEVRSESGAVITESHAAYIAAREKASAAFAAYYAVKDEKARDTNIVINAIRDAFYAAD LAAYEATEAAAESMGVAA
Sequences:
>Translated_178_residues MTLNVSEQAQPQARPPVSETKKEIAAAWAVCEAARKEVRDALYDCEDAARDAYEAREAAEEGARDAAFALYDADKKQEAF GAAMAVARAAWASYEAAEEEAFDEVRSESGAVITESHAAYIAAREKASAAFAAYYAVKDEKARDTNIVINAIRDAFYAAD LAAYEATEAAAESMGVAA >Mature_177_residues TLNVSEQAQPQARPPVSETKKEIAAAWAVCEAARKEVRDALYDCEDAARDAYEAREAAEEGARDAAFALYDADKKQEAFG AAMAVARAAWASYEAAEEEAFDEVRSESGAVITESHAAYIAAREKASAAFAAYYAVKDEKARDTNIVINAIRDAFYAADL AAYEATEAAAESMGVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19035; Mature: 18904
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNVSEQAQPQARPPVSETKKEIAAAWAVCEAARKEVRDALYDCEDAARDAYEAREAAE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGARDAAFALYDADKKQEAFGAAMAVARAAWASYEAAEEEAFDEVRSESGAVITESHAAY HCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHH IAAREKASAAFAAYYAVKDEKARDTNIVINAIRDAFYAADLAAYEATEAAAESMGVAA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TLNVSEQAQPQARPPVSETKKEIAAAWAVCEAARKEVRDALYDCEDAARDAYEAREAAE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGARDAAFALYDADKKQEAFGAAMAVARAAWASYEAAEEEAFDEVRSESGAVITESHAAY HCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHH IAAREKASAAFAAYYAVKDEKARDTNIVINAIRDAFYAADLAAYEATEAAAESMGVAA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA