| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681612
Identifier: 182681612
GI number: 182681612
Start: 1218622
End: 1219035
Strand: Direct
Name: 182681612
Synonym: XfasM23_1070
Alternate gene names: NA
Gene position: 1218622-1219035 (Clockwise)
Preceding gene: 182681611
Following gene: 182681613
Centisome position: 48.06
GC content: 53.14
Gene sequence:
>414_bases ATGAGCACCATATACCCCAACACAATCTTCGCCCTGGAATGGGGGAGATATACCCAAATCAGAGACGAAACCGGTAAGCA CATCATCACGCAAGATGAGCGCACCTGTATGCAATGGACGGCAGAAACTCTTGGGGAGTTTGATTACTACGAAGCGGAAG AGGTTTGTCGTAACTCACGCATTGGTGGCTACGACGATTGGCGTCGTCCTACGGACGAAGAGCTACTGGCCGTAACACGA GGCATTGCGGCATGGACCTGCACCCCGAGTGAAAACACAAGGATAGGGAGCGCATGGGTTGGCGGAATGGGTTGTCTGTC TACAGAGGATACAGATGACAAATTTTCGGTTATCGCTGTGCGCGGGCCGGTGCGTACTGACGCCACTGCTACACCAAAGG CAGGTGAGTCATGA
Upstream 100 bases:
>100_bases CCAATATTGTTATTAATGCTATTCGTGATGCTTTTTATGCCGCCGACCTTGCTGCATACGAAGCCACTGAAGCTGCCGCT GAAAGCATGGGGGTGGCCGC
Downstream 100 bases:
>100_bases CTGGCATTGGCTACAGCAGTTATAGCGACCCACGCCTACAACCACCGCAAGACGATGCTAAAGAGTATTTCGCAGAACGG GTTAATGCTCGCGTTCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSTIYPNTIFALEWGRYTQIRDETGKHIITQDERTCMQWTAETLGEFDYYEAEEVCRNSRIGGYDDWRRPTDEELLAVTR GIAAWTCTPSENTRIGSAWVGGMGCLSTEDTDDKFSVIAVRGPVRTDATATPKAGES
Sequences:
>Translated_137_residues MSTIYPNTIFALEWGRYTQIRDETGKHIITQDERTCMQWTAETLGEFDYYEAEEVCRNSRIGGYDDWRRPTDEELLAVTR GIAAWTCTPSENTRIGSAWVGGMGCLSTEDTDDKFSVIAVRGPVRTDATATPKAGES >Mature_136_residues STIYPNTIFALEWGRYTQIRDETGKHIITQDERTCMQWTAETLGEFDYYEAEEVCRNSRIGGYDDWRRPTDEELLAVTRG IAAWTCTPSENTRIGSAWVGGMGCLSTEDTDDKFSVIAVRGPVRTDATATPKAGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15369; Mature: 15238
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIYPNTIFALEWGRYTQIRDETGKHIITQDERTCMQWTAETLGEFDYYEAEEVCRNSR CCCCCCCEEEEEECCCCEEECCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCC IGGYDDWRRPTDEELLAVTRGIAAWTCTPSENTRIGSAWVGGMGCLSTEDTDDKFSVIAV CCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEECCEECCCCCCCCCCCCCCCEEEEEE RGPVRTDATATPKAGES ECCCCCCCCCCCCCCCC >Mature Secondary Structure STIYPNTIFALEWGRYTQIRDETGKHIITQDERTCMQWTAETLGEFDYYEAEEVCRNSR CCCCCCEEEEEECCCCEEECCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCC IGGYDDWRRPTDEELLAVTRGIAAWTCTPSENTRIGSAWVGGMGCLSTEDTDDKFSVIAV CCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEECCEECCCCCCCCCCCCCCCEEEEEE RGPVRTDATATPKAGES ECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA