| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681607
Identifier: 182681607
GI number: 182681607
Start: 1215393
End: 1216109
Strand: Direct
Name: 182681607
Synonym: XfasM23_1065
Alternate gene names: NA
Gene position: 1215393-1216109 (Clockwise)
Preceding gene: 182681581
Following gene: 182681608
Centisome position: 47.93
GC content: 50.77
Gene sequence:
>717_bases ATGTCATTGAAAAGATCGAATACAGCGCATCAAAATCGGGTTGGAGCCGATCTGCCAGTAGAATTGGTGTTTCCAAGCAA CCAAATCACTACCGGAGATCGGCATGAGCGAATTAGAGGAGCTATACGACTCGAAGTTGGCCTTGTACATGGCCATGCGC TTAGGGCGATTAGCGATAGTCTTCATATTCGTCATGTTTCATCTTGCTTTGTGGATGTGTGCGTTGACGTTGCTTTGGGT TTTTCAGATTTCCCCAACATCCATCGCATCGGCTTGCCTGCGAATCCTCGACTCAAATCTAATTCAAGCAATAAGTCTTT CCGGGCTTTCACTTGTGACCGTGGCGGTCGTTTACAGAAAAGTGGCAAGGCGGGCTTGGATGATCGTCCTCCACAAATGG ATAAAAGGGTACGTAAAGAAGCACCCCACAGCGAAGTAAAAAAAGTGCCTTTCTCACGCCGCATCGGACACCTCCTGCCT GTGGGCTGTGGGGGGAGCGCCGAAGATGTCTGGGCGAAGATCGTAACGAGAAACACGGCCACCACTGGCTTCATCAAGGC GTCGCGCCAGTGCACCATCAAATCGCTGTCCCTTGCAGAGAGCCTTTCGCAGGTAACCAATGGTGGTATTCGCTTTACGA GCGTAGTGCGCCTGTTCGGTTGGGCTGAGTGTTGTGAGGTAAGTACGCAGGGTTTCCATGACGTGAATATACCCTAG
Upstream 100 bases:
>100_bases TGATCAAATCGCGTTCGGCATCGTTAAAACGCACCTTCACCGGGTGACTACGAATGTGAGTTGGATCGGCGTACATAGAT TCATTACCAAGGGTTATTCA
Downstream 100 bases:
>100_bases GGTAATTACCCAATTCAATACCCATAGACAATTTACTTAAAGGTAACGAAATTGTCGAATAGCAACATGGATAAATACGA AATGCGCCGATTAGCGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSLKRSNTAHQNRVGADLPVELVFPSNQITTGDRHERIRGAIRLEVGLVHGHALRAISDSLHIRHVSSCFVDVCVDVALG FSDFPNIHRIGLPANPRLKSNSSNKSFRAFTCDRGGRLQKSGKAGLDDRPPQMDKRVRKEAPHSEVKKVPFSRRIGHLLP VGCGGSAEDVWAKIVTRNTATTGFIKASRQCTIKSLSLAESLSQVTNGGIRFTSVVRLFGWAECCEVSTQGFHDVNIP
Sequences:
>Translated_238_residues MSLKRSNTAHQNRVGADLPVELVFPSNQITTGDRHERIRGAIRLEVGLVHGHALRAISDSLHIRHVSSCFVDVCVDVALG FSDFPNIHRIGLPANPRLKSNSSNKSFRAFTCDRGGRLQKSGKAGLDDRPPQMDKRVRKEAPHSEVKKVPFSRRIGHLLP VGCGGSAEDVWAKIVTRNTATTGFIKASRQCTIKSLSLAESLSQVTNGGIRFTSVVRLFGWAECCEVSTQGFHDVNIP >Mature_237_residues SLKRSNTAHQNRVGADLPVELVFPSNQITTGDRHERIRGAIRLEVGLVHGHALRAISDSLHIRHVSSCFVDVCVDVALGF SDFPNIHRIGLPANPRLKSNSSNKSFRAFTCDRGGRLQKSGKAGLDDRPPQMDKRVRKEAPHSEVKKVPFSRRIGHLLPV GCGGSAEDVWAKIVTRNTATTGFIKASRQCTIKSLSLAESLSQVTNGGIRFTSVVRLFGWAECCEVSTQGFHDVNIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26073; Mature: 25942
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKRSNTAHQNRVGADLPVELVFPSNQITTGDRHERIRGAIRLEVGLVHGHALRAISDS CCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHEEEEEEEEECHHHHHHHHHH LHIRHVSSCFVDVCVDVALGFSDFPNIHRIGLPANPRLKSNSSNKSFRAFTCDRGGRLQK HHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCC SGKAGLDDRPPQMDKRVRKEAPHSEVKKVPFSRRIGHLLPVGCGGSAEDVWAKIVTRNTA CCCCCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHCCEEEECCCCCHHHHHHHHHHCCCC TTGFIKASRQCTIKSLSLAESLSQVTNGGIRFTSVVRLFGWAECCEVSTQGFHDVNIP CHHEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCC >Mature Secondary Structure SLKRSNTAHQNRVGADLPVELVFPSNQITTGDRHERIRGAIRLEVGLVHGHALRAISDS CCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHEEEEEEEEECHHHHHHHHHH LHIRHVSSCFVDVCVDVALGFSDFPNIHRIGLPANPRLKSNSSNKSFRAFTCDRGGRLQK HHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCC SGKAGLDDRPPQMDKRVRKEAPHSEVKKVPFSRRIGHLLPVGCGGSAEDVWAKIVTRNTA CCCCCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHCCEEEECCCCCHHHHHHHHHHCCCC TTGFIKASRQCTIKSLSLAESLSQVTNGGIRFTSVVRLFGWAECCEVSTQGFHDVNIP CHHEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA