| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681581
Identifier: 182681581
GI number: 182681581
Start: 1188438
End: 1188719
Strand: Direct
Name: 182681581
Synonym: XfasM23_1039
Alternate gene names: NA
Gene position: 1188438-1188719 (Clockwise)
Preceding gene: 182681580
Following gene: 182681607
Centisome position: 46.87
GC content: 55.32
Gene sequence:
>282_bases ATGAGCAACGAGCGATTCACAAGTGTGTGGGATGCCATTGAGGACACTCCCGAAGCCGCCGAAAACATGAAGTTACGTTC CGCACTCATGATGGCCCTGAAACAACACATCGAAACGGCTGCGCTGAGTCAGTCTCAAGCCGCTACGCTGTTCGGTGTCA CGCAGCCTCGCGTGTCAGATTTAATGCGCGGCAAAATCAACCTGTTCGGCTTGGATGCACTGGTCAACATGGCTGCGGCG GCTGGGATGCATGTGGAAATGCGCGTACTGAAAGCGGCGTGA
Upstream 100 bases:
>100_bases ATGTGTTGCATTGCTTCCAAAAGAAAACTGAGAAAACCACCAAAGGCGATCTTGATGTAGCGGCTAAACGCTACCGTGAT CTGTTTAATGAGGTAGGACA
Downstream 100 bases:
>100_bases GTGCTTCGCCGGTTTTTTATCTGACCATTGCATGATTCCAATCGCAGCCTATGTATTGGAAGCCGATGCTGTCGTTTCCA CCAATGGCCACACATCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Conserved Small Protein; Phage Associated Protein
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSNERFTSVWDAIEDTPEAAENMKLRSALMMALKQHIETAALSQSQAATLFGVTQPRVSDLMRGKINLFGLDALVNMAAA AGMHVEMRVLKAA
Sequences:
>Translated_93_residues MSNERFTSVWDAIEDTPEAAENMKLRSALMMALKQHIETAALSQSQAATLFGVTQPRVSDLMRGKINLFGLDALVNMAAA AGMHVEMRVLKAA >Mature_92_residues SNERFTSVWDAIEDTPEAAENMKLRSALMMALKQHIETAALSQSQAATLFGVTQPRVSDLMRGKINLFGLDALVNMAAAA GMHVEMRVLKAA
Specific function: Unknown
COG id: COG5606
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10121; Mature: 9990
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNERFTSVWDAIEDTPEAAENMKLRSALMMALKQHIETAALSQSQAATLFGVTQPRVSD CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHH LMRGKINLFGLDALVNMAAAAGMHVEMRVLKAA HHHCCCCEEHHHHHHHHHHHCCCHHHHHEECCC >Mature Secondary Structure SNERFTSVWDAIEDTPEAAENMKLRSALMMALKQHIETAALSQSQAATLFGVTQPRVSD CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHH LMRGKINLFGLDALVNMAAAAGMHVEMRVLKAA HHHCCCCEEHHHHHHHHHHHCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA