| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681529
Identifier: 182681529
GI number: 182681529
Start: 1139814
End: 1141340
Strand: Direct
Name: 182681529
Synonym: XfasM23_0983
Alternate gene names: NA
Gene position: 1139814-1141340 (Clockwise)
Preceding gene: 182681528
Following gene: 182681530
Centisome position: 44.95
GC content: 47.48
Gene sequence:
>1527_bases ATGCCCCTTCCCAGGGAGAAGGGGGCGTATCGTGTTTGGTTTTATATTTTTGTTCGCGTTGTGTATTGCGGGCATGATTA TTTTTTGGGACTAGCCGCGATGCGTCGTGTTATTTTTCTTTTTTTTCTTGTTTTTTGTTCTAGTGTGTTCGCCGCGCCTA AGTGTTCTGCTCCTATTGCTACTCCTGCATCTGGAATATTTTCAGATCAAGCAGAAGCCTATGGGGCTGCTCAAAGTAAT CTTCAGTATCAGCTTTGTATGAGTGGCTATACAAATACTGGGCGTGTTAAGACTGGTGATAGGCAATATGTAGTTGTCTT GGATAGTCCTTCTGCTGTTGTCGGTTATTATAGTTATTATACGTCTTGTTCTGAAAAGCAGAATGATGTCTATACCTTTT CTGATAATTATTATTCTAATTTTAATAATGGCACGCGTTCTTGTTTTGTTGGTTGGAAGCCGTCTGCAAATTCGTCATCT TGTGAAGTTGTGATGCATGCTGATGCTGCGACGCATAGAATTATTGCGGTTCATACAGGAACAGTATGTGATGCGTTGAA TTATAAGGACGACTGTCTTTCACATCCTGGTTATGTATATAAATCGGGCGGGTCTGGTGCCGTTTCGGCTGTGGAAGGAT ATGGGGATTGTGTTCCGGCAAAGCCTCAATGTTCTTTGGATCAGAAAAACGTAGGCGGTGTCTGTGTTGATAAATGTCCT GATGGGATGTTGGAGGACCCTGTTAGGCATGAGTGCGAATTTGATCGTAAGGAGTGTCCTCTGGGCCAGATGCGTGCTCC TGATGGGACTTGCGTGAAAACTTCTGACTCGTGTCCTAGTGGTCAGGCTCGCGGTGCAGATGGTGCGTGTAAGCGGGATA AAGACGGCGATGGTAAGCCAGATGATGAGCAATCCGGTAAGGATGGGGATGAGGGGAGGTCTTCTTTTTCGTGGTCTGGT GGGTGTGATGTTGCTCCGTCGTGTTCTGGTGATCCGGTGCTGTGTGGTCAAGTGCGTATTCAGTGGCGTATTGAGTGCAA TTTGCGTCCTGATGTAAAGGTGAGCGGTGGCGGGTGTGACTCTGTTCCGGTATGTACTGGCAAGAAATGCGATGCGATGG AGTACAGTTCGTTAGTTTTGCAATGGCGTACGGCGTGCGCTGTGGAGCGTGCTACAGGAGTAGCCTCGGGCGGTAGTGGT GATAGGGATCCCAATGTGGCAGCGATAAAAGATGCGTTAACAGGGAAGGATGGTGTTGTTGATACGGGGGATGAGGGCAA GCCATCTTCAGCTTTTTCGGATGGGTCTTCAGCAGGAGGTGATGACAAGGACGCTTCAAAGTTTGATGACCAGGGGCGGG GGTATTCCCGCTCGTGTTTTGAGCCTTTAACTGTGGATGTGTTCGGCAGTGAGCTCACGATTGATCTTTCGCCTTTGTGC CAGTTTTTTCAGGTAGGTGGCAGGCTGGTTCTTTTATTCTCTGCGCTGTCTAGTTTTCGGATTATTAGCGGTATTTCTAA GGAGTAG
Upstream 100 bases:
>100_bases GTGCTTCTTCATGTTTACAAATGGATTAGAAAGGCATTTTAAGGCGTATTTATTTTTTTTTGTTTGTGTTGAGGTGGGCG GGGAAGGGGTGTTTTGAATA
Downstream 100 bases:
>100_bases CGGTAATGCCTACTTTTTTGGCGGCTCTGCTAACAGGGCTGTTTAATTTATGCAAGTCCAAGCTGGGCTATTTTGTGGCT ACTGCATTTGTCTGGTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MPLPREKGAYRVWFYIFVRVVYCGHDYFLGLAAMRRVIFLFFLVFCSSVFAAPKCSAPIATPASGIFSDQAEAYGAAQSN LQYQLCMSGYTNTGRVKTGDRQYVVVLDSPSAVVGYYSYYTSCSEKQNDVYTFSDNYYSNFNNGTRSCFVGWKPSANSSS CEVVMHADAATHRIIAVHTGTVCDALNYKDDCLSHPGYVYKSGGSGAVSAVEGYGDCVPAKPQCSLDQKNVGGVCVDKCP DGMLEDPVRHECEFDRKECPLGQMRAPDGTCVKTSDSCPSGQARGADGACKRDKDGDGKPDDEQSGKDGDEGRSSFSWSG GCDVAPSCSGDPVLCGQVRIQWRIECNLRPDVKVSGGGCDSVPVCTGKKCDAMEYSSLVLQWRTACAVERATGVASGGSG DRDPNVAAIKDALTGKDGVVDTGDEGKPSSAFSDGSSAGGDDKDASKFDDQGRGYSRSCFEPLTVDVFGSELTIDLSPLC QFFQVGGRLVLLFSALSSFRIISGISKE
Sequences:
>Translated_508_residues MPLPREKGAYRVWFYIFVRVVYCGHDYFLGLAAMRRVIFLFFLVFCSSVFAAPKCSAPIATPASGIFSDQAEAYGAAQSN LQYQLCMSGYTNTGRVKTGDRQYVVVLDSPSAVVGYYSYYTSCSEKQNDVYTFSDNYYSNFNNGTRSCFVGWKPSANSSS CEVVMHADAATHRIIAVHTGTVCDALNYKDDCLSHPGYVYKSGGSGAVSAVEGYGDCVPAKPQCSLDQKNVGGVCVDKCP DGMLEDPVRHECEFDRKECPLGQMRAPDGTCVKTSDSCPSGQARGADGACKRDKDGDGKPDDEQSGKDGDEGRSSFSWSG GCDVAPSCSGDPVLCGQVRIQWRIECNLRPDVKVSGGGCDSVPVCTGKKCDAMEYSSLVLQWRTACAVERATGVASGGSG DRDPNVAAIKDALTGKDGVVDTGDEGKPSSAFSDGSSAGGDDKDASKFDDQGRGYSRSCFEPLTVDVFGSELTIDLSPLC QFFQVGGRLVLLFSALSSFRIISGISKE >Mature_507_residues PLPREKGAYRVWFYIFVRVVYCGHDYFLGLAAMRRVIFLFFLVFCSSVFAAPKCSAPIATPASGIFSDQAEAYGAAQSNL QYQLCMSGYTNTGRVKTGDRQYVVVLDSPSAVVGYYSYYTSCSEKQNDVYTFSDNYYSNFNNGTRSCFVGWKPSANSSSC EVVMHADAATHRIIAVHTGTVCDALNYKDDCLSHPGYVYKSGGSGAVSAVEGYGDCVPAKPQCSLDQKNVGGVCVDKCPD GMLEDPVRHECEFDRKECPLGQMRAPDGTCVKTSDSCPSGQARGADGACKRDKDGDGKPDDEQSGKDGDEGRSSFSWSGG CDVAPSCSGDPVLCGQVRIQWRIECNLRPDVKVSGGGCDSVPVCTGKKCDAMEYSSLVLQWRTACAVERATGVASGGSGD RDPNVAAIKDALTGKDGVVDTGDEGKPSSAFSDGSSAGGDDKDASKFDDQGRGYSRSCFEPLTVDVFGSELTIDLSPLCQ FFQVGGRLVLLFSALSSFRIISGISKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54285; Mature: 54154
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPREKGAYRVWFYIFVRVVYCGHDYFLGLAAMRRVIFLFFLVFCSSVFAAPKCSAPIA CCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TPASGIFSDQAEAYGAAQSNLQYQLCMSGYTNTGRVKTGDRQYVVVLDSPSAVVGYYSYY CCCCCCCCCHHHHHCCHHCCCEEEEEECCCCCCCCEEECCCEEEEEECCCCCEEEHHHHH TSCSEKQNDVYTFSDNYYSNFNNGTRSCFVGWKPSANSSSCEVVMHADAATHRIIAVHTG HCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECC TVCDALNYKDDCLSHPGYVYKSGGSGAVSAVEGYGDCVPAKPQCSLDQKNVGGVCVDKCP CHHHHCCCCHHHHCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCC DGMLEDPVRHECEFDRKECPLGQMRAPDGTCVKTSDSCPSGQARGADGACKRDKDGDGKP CCCCCCCHHHHCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC DDEQSGKDGDEGRSSFSWSGGCDVAPSCSGDPVLCGQVRIQWRIECNLRPDVKVSGGGCD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEECCCCCC SVPVCTGKKCDAMEYSSLVLQWRTACAVERATGVASGGSGDRDPNVAAIKDALTGKDGVV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCE DTGDEGKPSSAFSDGSSAGGDDKDASKFDDQGRGYSRSCFEPLTVDVFGSELTIDLSPLC ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEHHHHH QFFQVGGRLVLLFSALSSFRIISGISKE HHHHHCCCEEHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PLPREKGAYRVWFYIFVRVVYCGHDYFLGLAAMRRVIFLFFLVFCSSVFAAPKCSAPIA CCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TPASGIFSDQAEAYGAAQSNLQYQLCMSGYTNTGRVKTGDRQYVVVLDSPSAVVGYYSYY CCCCCCCCCHHHHHCCHHCCCEEEEEECCCCCCCCEEECCCEEEEEECCCCCEEEHHHHH TSCSEKQNDVYTFSDNYYSNFNNGTRSCFVGWKPSANSSSCEVVMHADAATHRIIAVHTG HCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECC TVCDALNYKDDCLSHPGYVYKSGGSGAVSAVEGYGDCVPAKPQCSLDQKNVGGVCVDKCP CHHHHCCCCHHHHCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCC DGMLEDPVRHECEFDRKECPLGQMRAPDGTCVKTSDSCPSGQARGADGACKRDKDGDGKP CCCCCCCHHHHCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC DDEQSGKDGDEGRSSFSWSGGCDVAPSCSGDPVLCGQVRIQWRIECNLRPDVKVSGGGCD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEECCCCCC SVPVCTGKKCDAMEYSSLVLQWRTACAVERATGVASGGSGDRDPNVAAIKDALTGKDGVV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCE DTGDEGKPSSAFSDGSSAGGDDKDASKFDDQGRGYSRSCFEPLTVDVFGSELTIDLSPLC ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEHHHHH QFFQVGGRLVLLFSALSSFRIISGISKE HHHHHCCCEEHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA