| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681530
Identifier: 182681530
GI number: 182681530
Start: 1141346
End: 1141717
Strand: Direct
Name: 182681530
Synonym: XfasM23_0984
Alternate gene names: NA
Gene position: 1141346-1141717 (Clockwise)
Preceding gene: 182681529
Following gene: 182681531
Centisome position: 45.01
GC content: 46.77
Gene sequence:
>372_bases ATGCCTACTTTTTTGGCGGCTCTGCTAACAGGGCTGTTTAATTTATGCAAGTCCAAGCTGGGCTATTTTGTGGCTACTGC ATTTGTCTGGTTGGGCATTAATTGGGGGTCTTATCATTTTGTAATTTCTCCCCTAGTTGAGCAGTTATATACGTACGTCG ATAGTGTGGGGACTGCTGGCGGGCGGTTTGGCGAACTAGCTTTAAGGGCTTTGGGTCTTCTTAACTTTGATCGTGCTTTG ACGATGATTATTTCTGCGTATGTGAGTAGGTTTGCCATGCTCAATGGCCGGTTGTATCTGTTTAAGCGAGGTTATGGAGT GGCTCCTCCAGCTTCTCCAAAGCATGAGCCGTTTATTCCACCAGCGGGGTAA
Upstream 100 bases:
>100_bases CTTTGTGCCAGTTTTTTCAGGTAGGTGGCAGGCTGGTTCTTTTATTCTCTGCGCTGTCTAGTTTTCGGATTATTAGCGGT ATTTCTAAGGAGTAGCGGTA
Downstream 100 bases:
>100_bases TGTTATGCCTATTCATGTTATTACTGCGCTTCCTGGTGGTGGGAAAACAGCCATCATGGTTGAGATGCTAGAGGCAGAAG CCAAGATTGGTGCACGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MPTFLAALLTGLFNLCKSKLGYFVATAFVWLGINWGSYHFVISPLVEQLYTYVDSVGTAGGRFGELALRALGLLNFDRAL TMIISAYVSRFAMLNGRLYLFKRGYGVAPPASPKHEPFIPPAG
Sequences:
>Translated_123_residues MPTFLAALLTGLFNLCKSKLGYFVATAFVWLGINWGSYHFVISPLVEQLYTYVDSVGTAGGRFGELALRALGLLNFDRAL TMIISAYVSRFAMLNGRLYLFKRGYGVAPPASPKHEPFIPPAG >Mature_122_residues PTFLAALLTGLFNLCKSKLGYFVATAFVWLGINWGSYHFVISPLVEQLYTYVDSVGTAGGRFGELALRALGLLNFDRALT MIISAYVSRFAMLNGRLYLFKRGYGVAPPASPKHEPFIPPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13482; Mature: 13351
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFLAALLTGLFNLCKSKLGYFVATAFVWLGINWGSYHFVISPLVEQLYTYVDSVGTAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC GRFGELALRALGLLNFDRALTMIISAYVSRFAMLNGRLYLFKRGYGVAPPASPKHEPFIP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCC PAG CCC >Mature Secondary Structure PTFLAALLTGLFNLCKSKLGYFVATAFVWLGINWGSYHFVISPLVEQLYTYVDSVGTAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC GRFGELALRALGLLNFDRALTMIISAYVSRFAMLNGRLYLFKRGYGVAPPASPKHEPFIP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCC PAG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA