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The map label for this gene is tolR [H]

Identifier: 182681493

GI number: 182681493

Start: 1112288

End: 1112722

Strand: Direct

Name: tolR [H]

Synonym: XfasM23_0947

Alternate gene names: 182681493

Gene position: 1112288-1112722 (Clockwise)

Preceding gene: 182681492

Following gene: 182681494

Centisome position: 43.87

GC content: 46.44

Gene sequence:

>435_bases
GTGTTCAGCATGTATCGCCGTAAACGCCGCAAGCTCAAATCTGAGATTAACGTTGTGCCGTATATCGACGTGATGTTGGT
ATTGCTGGTCATTTTTATGGTCACCGCACCGCTGTTGACATTGAGCATCAATGTAGATTTACCAGTTGCAAACGCCAAGG
CACTGGAGAATAAGCAGGATCCGATTGTAGTCATCGTCAATAGTGATGGAAAGCTCGCTTTGCAGTTACCCAAAAGTAAG
CCTGAAAACATAAATGTGGATGCGTTGGGTAAAAAATTGACTTCAGTCGTCTCTCAAGACAAGAACGTGCGTGTCGTGGT
TGCCGCTGATGGGGCTGTTGCTTATAAGGACGTGATTGCCGCAATGAATGCAATCAAGGATGCCAAGATTGAGAAAGTCA
GCCTACTGACTCAAGCAGAGGCCAATGCACGCTGA

Upstream 100 bases:

>100_bases
GCGTTATGAAACTTTTGCCGAGGAATTCAGCGCTATCCTGCAACGGCAGGTTGGTATCGACGAATAACCATATCGCACAC
GACGCAGGAGCCTGATAGTA

Downstream 100 bases:

>100_bases
CTCACGCTTGGGCCGCTCACGGCGCCGCGAAGGGGTTGTGTTGCCCGTGCTGATGGCCCTATTGCTACATGCCTTTATTG
GGGGGGTGTTTTTGCTTTCT

Product: protein TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MFSMYRRKRRKLKSEINVVPYIDVMLVLLVIFMVTAPLLTLSINVDLPVANAKALENKQDPIVVIVNSDGKLALQLPKSK
PENINVDALGKKLTSVVSQDKNVRVVVAADGAVAYKDVIAAMNAIKDAKIEKVSLLTQAEANAR

Sequences:

>Translated_144_residues
MFSMYRRKRRKLKSEINVVPYIDVMLVLLVIFMVTAPLLTLSINVDLPVANAKALENKQDPIVVIVNSDGKLALQLPKSK
PENINVDALGKKLTSVVSQDKNVRVVVAADGAVAYKDVIAAMNAIKDAKIEKVSLLTQAEANAR
>Mature_144_residues
MFSMYRRKRRKLKSEINVVPYIDVMLVLLVIFMVTAPLLTLSINVDLPVANAKALENKQDPIVVIVNSDGKLALQLPKSK
PENINVDALGKKLTSVVSQDKNVRVVVAADGAVAYKDVIAAMNAIKDAKIEKVSLLTQAEANAR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=131, Percent_Identity=29.7709923664122, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15740; Mature: 15740

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSMYRRKRRKLKSEINVVPYIDVMLVLLVIFMVTAPLLTLSINVDLPVANAKALENKQD
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHCCCCC
PIVVIVNSDGKLALQLPKSKPENINVDALGKKLTSVVSQDKNVRVVVAADGAVAYKDVIA
CEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH
AMNAIKDAKIEKVSLLTQAEANAR
HHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFSMYRRKRRKLKSEINVVPYIDVMLVLLVIFMVTAPLLTLSINVDLPVANAKALENKQD
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHCCCCC
PIVVIVNSDGKLALQLPKSKPENINVDALGKKLTSVVSQDKNVRVVVAADGAVAYKDVIA
CEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH
AMNAIKDAKIEKVSLLTQAEANAR
HHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]