| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681494
Identifier: 182681494
GI number: 182681494
Start: 1112712
End: 1113752
Strand: Direct
Name: 182681494
Synonym: XfasM23_0948
Alternate gene names: NA
Gene position: 1112712-1113752 (Clockwise)
Preceding gene: 182681493
Following gene: 182681495
Centisome position: 43.88
GC content: 51.39
Gene sequence:
>1041_bases ATGCACGCTGACTCACGCTTGGGCCGCTCACGGCGCCGCGAAGGGGTTGTGTTGCCCGTGCTGATGGCCCTATTGCTACA TGCCTTTATTGGGGGGGTGTTTTTGCTTTCTTGGTTATGGTCCCCGCAACATAAGGTGTCTTCTTCTGATGCTGATTCAA GTATCGAAGCAAGTTTGGATGTATCCATTAACGATACCCGTATTGCACGTCAAGCGTTGCGTAACTTGCAAGTTCAAGCT CCTATGCCGATGCAACTACCACTGCAAGATACAACTCCACCACAACCAATTTTTGCGTCGCAGCCGCAGAATGCGCTTAC CTCACCTCAGACTGAGGCACAGGAGCGCATTATCCAACCTGACAAGGTTGATCAGAAACAAGTTAGCGCACTCGCTGAAT CGCAAGAGATGGCTAAACGGGAGCAGGAAGCCAAGCATCGTCAGGAGCAGATCGATCTCACTGAGGAACGCAAACGTCAG CAACAAGCCGAGCAGAAGTTGCGTTTGGCCCGCCAGCAACAAGAAATCATGCGGAAGCAGGTTGAGGAGCATGCTCAGAT TGATCGCCTGAAAAAATTGACTGAATTGCGTAAACGTCGTGAGCAATTGGAAACACAGATACAAAGCGACGCTAAACAGG CCGATCTAGCCGAACAAAAGTTGCGTCAGCTAGCTGCTGAACGTTCTCAGCAATCCTCTCCCTCTCCAGTCAACAACACA AACGGGGTGCAGGGATCTGGGAAAAACGTTGACAATAAAGGGCTGCGTGATAAGTACAAGGCAGCAATTCAGCAGGCAGT GAGTGGCCAGTGGAGCCGCCCCCCCTCCGTTCCTCTCGGTCAGAAGTGCATGATTCACATTACCCAGTTACCTGGTGGGC GTGTACTTAGTGCTGAGGTCGCACCCGATTGTCCGTACGATGATGCAGGACGGCGTTCGATTGAGAGTGCGGTGATGCGC GCACAGCCGCTACCTTATCGTGGTTTTGAACCGGTATTTGAGCGTGATGTGTATTTCAAATTTATTCCTGAAGACCACTG A
Upstream 100 bases:
>100_bases GCTGATGGGGCTGTTGCTTATAAGGACGTGATTGCCGCAATGAATGCAATCAAGGATGCCAAGATTGAGAAAGTCAGCCT ACTGACTCAAGCAGAGGCCA
Downstream 100 bases:
>100_bases ATAAATCCGTAATCTCTAGCAATGTTTGCATTTCTACTGGGTGCGACTTCGATACAGGCAAACTCGCTGCATTGAGCTTG CCTTCTGTTCTCATTCTTGC
Product: protein TolA
Products: NA
Alternate protein names: LA Protein
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MHADSRLGRSRRREGVVLPVLMALLLHAFIGGVFLLSWLWSPQHKVSSSDADSSIEASLDVSINDTRIARQALRNLQVQA PMPMQLPLQDTTPPQPIFASQPQNALTSPQTEAQERIIQPDKVDQKQVSALAESQEMAKREQEAKHRQEQIDLTEERKRQ QQAEQKLRLARQQQEIMRKQVEEHAQIDRLKKLTELRKRREQLETQIQSDAKQADLAEQKLRQLAAERSQQSSPSPVNNT NGVQGSGKNVDNKGLRDKYKAAIQQAVSGQWSRPPSVPLGQKCMIHITQLPGGRVLSAEVAPDCPYDDAGRRSIESAVMR AQPLPYRGFEPVFERDVYFKFIPEDH
Sequences:
>Translated_346_residues MHADSRLGRSRRREGVVLPVLMALLLHAFIGGVFLLSWLWSPQHKVSSSDADSSIEASLDVSINDTRIARQALRNLQVQA PMPMQLPLQDTTPPQPIFASQPQNALTSPQTEAQERIIQPDKVDQKQVSALAESQEMAKREQEAKHRQEQIDLTEERKRQ QQAEQKLRLARQQQEIMRKQVEEHAQIDRLKKLTELRKRREQLETQIQSDAKQADLAEQKLRQLAAERSQQSSPSPVNNT NGVQGSGKNVDNKGLRDKYKAAIQQAVSGQWSRPPSVPLGQKCMIHITQLPGGRVLSAEVAPDCPYDDAGRRSIESAVMR AQPLPYRGFEPVFERDVYFKFIPEDH >Mature_346_residues MHADSRLGRSRRREGVVLPVLMALLLHAFIGGVFLLSWLWSPQHKVSSSDADSSIEASLDVSINDTRIARQALRNLQVQA PMPMQLPLQDTTPPQPIFASQPQNALTSPQTEAQERIIQPDKVDQKQVSALAESQEMAKREQEAKHRQEQIDLTEERKRQ QQAEQKLRLARQQQEIMRKQVEEHAQIDRLKKLTELRKRREQLETQIQSDAKQADLAEQKLRQLAAERSQQSSPSPVNNT NGVQGSGKNVDNKGLRDKYKAAIQQAVSGQWSRPPSVPLGQKCMIHITQLPGGRVLSAEVAPDCPYDDAGRRSIESAVMR AQPLPYRGFEPVFERDVYFKFIPEDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39205; Mature: 39205
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHADSRLGRSRRREGVVLPVLMALLLHAFIGGVFLLSWLWSPQHKVSSSDADSSIEASLD CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEE VSINDTRIARQALRNLQVQAPMPMQLPLQDTTPPQPIFASQPQNALTSPQTEAQERIIQP CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCC DKVDQKQVSALAESQEMAKREQEAKHRQEQIDLTEERKRQQQAEQKLRLARQQQEIMRKQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEEHAQIDRLKKLTELRKRREQLETQIQSDAKQADLAEQKLRQLAAERSQQSSPSPVNNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NGVQGSGKNVDNKGLRDKYKAAIQQAVSGQWSRPPSVPLGQKCMIHITQLPGGRVLSAEV CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEECCCCCEEECCC APDCPYDDAGRRSIESAVMRAQPLPYRGFEPVFERDVYFKFIPEDH CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCC >Mature Secondary Structure MHADSRLGRSRRREGVVLPVLMALLLHAFIGGVFLLSWLWSPQHKVSSSDADSSIEASLD CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEE VSINDTRIARQALRNLQVQAPMPMQLPLQDTTPPQPIFASQPQNALTSPQTEAQERIIQP CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCC DKVDQKQVSALAESQEMAKREQEAKHRQEQIDLTEERKRQQQAEQKLRLARQQQEIMRKQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEEHAQIDRLKKLTELRKRREQLETQIQSDAKQADLAEQKLRQLAAERSQQSSPSPVNNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NGVQGSGKNVDNKGLRDKYKAAIQQAVSGQWSRPPSVPLGQKCMIHITQLPGGRVLSAEV CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEECCCCCEEECCC APDCPYDDAGRRSIESAVMRAQPLPYRGFEPVFERDVYFKFIPEDH CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA