| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681481
Identifier: 182681481
GI number: 182681481
Start: 1101507
End: 1101980
Strand: Reverse
Name: 182681481
Synonym: XfasM23_0935
Alternate gene names: NA
Gene position: 1101980-1101507 (Counterclockwise)
Preceding gene: 182681499
Following gene: 182681480
Centisome position: 43.46
GC content: 51.9
Gene sequence:
>474_bases ATGCGCTTTGCCATTAATCTGATCGTAAGCATGCTGTGCGCACTACTCCTGGCCGGATGTGGGCCGGTGCGTCGTATTTC CGAACCCACTGTTAACATCCAACAGTTGAGCGTAGACAAGAAAGACATCTGGTCGATAGATCTACGCCTACAAAATTACA GCAATGTCCCCATGCACTTCCAACGTGCGATGCTGTCACTGGAAACGGGCAGCCAAGTGGCTGGTACTTTGGATGTAAAA ATCAGCTTATTGATTGGTCCAGAAAGCGTGGATGTGACTAGCATTCAGCTGCAGCCAAGCGCTCTAGGGAAGATTGCCGT CGCTGATGCTCTAGCTGGTAACCATTCGCTTCCCTACAGGCTGAAGGGCAAGGTATGGGCAACATTGGAAGGCAGCAACA AGCCACGTGAGTTCGAGATTGATACGCGCAACATGCTCAACATGGCCCCCGGCCTGCCTGGTGTGCTTCGCTAA
Upstream 100 bases:
>100_bases AATTTCATAGTCTTTTTAACAGAGACAACTAAATCGCTTAAAAAGCTCTATCGAGTAATCTATTAAAATTCAACATCATT ACTCCCTAGGAATTAATATC
Downstream 100 bases:
>100_bases AGCTTTAGAAGGTTTGATAGCTGGAATAATGACAAGCTGAGTAAATCAAATCTATTGCGCACTTATTGATCATCTCTGTG ATGATCCAAGCGACGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRFAINLIVSMLCALLLAGCGPVRRISEPTVNIQQLSVDKKDIWSIDLRLQNYSNVPMHFQRAMLSLETGSQVAGTLDVK ISLLIGPESVDVTSIQLQPSALGKIAVADALAGNHSLPYRLKGKVWATLEGSNKPREFEIDTRNMLNMAPGLPGVLR
Sequences:
>Translated_157_residues MRFAINLIVSMLCALLLAGCGPVRRISEPTVNIQQLSVDKKDIWSIDLRLQNYSNVPMHFQRAMLSLETGSQVAGTLDVK ISLLIGPESVDVTSIQLQPSALGKIAVADALAGNHSLPYRLKGKVWATLEGSNKPREFEIDTRNMLNMAPGLPGVLR >Mature_157_residues MRFAINLIVSMLCALLLAGCGPVRRISEPTVNIQQLSVDKKDIWSIDLRLQNYSNVPMHFQRAMLSLETGSQVAGTLDVK ISLLIGPESVDVTSIQLQPSALGKIAVADALAGNHSLPYRLKGKVWATLEGSNKPREFEIDTRNMLNMAPGLPGVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17136; Mature: 17136
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFAINLIVSMLCALLLAGCGPVRRISEPTVNIQQLSVDKKDIWSIDLRLQNYSNVPMHF CEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHH QRAMLSLETGSQVAGTLDVKISLLIGPESVDVTSIQLQPSALGKIAVADALAGNHSLPYR HHHHHHHCCCCCEEEEEEEEEEEEECCCCCCEEEEEECHHHCCCEEEEHHHCCCCCCCEE LKGKVWATLEGSNKPREFEIDTRNMLNMAPGLPGVLR ECCEEEEEEECCCCCEEEEECCHHHHHCCCCCCCCCC >Mature Secondary Structure MRFAINLIVSMLCALLLAGCGPVRRISEPTVNIQQLSVDKKDIWSIDLRLQNYSNVPMHF CEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHH QRAMLSLETGSQVAGTLDVKISLLIGPESVDVTSIQLQPSALGKIAVADALAGNHSLPYR HHHHHHHCCCCCEEEEEEEEEEEEECCCCCCEEEEEECHHHCCCEEEEHHHCCCCCCCEE LKGKVWATLEGSNKPREFEIDTRNMLNMAPGLPGVLR ECCEEEEEEECCCCCEEEEECCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA