| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681447
Identifier: 182681447
GI number: 182681447
Start: 1067016
End: 1067486
Strand: Direct
Name: 182681447
Synonym: XfasM23_0898
Alternate gene names: NA
Gene position: 1067016-1067486 (Clockwise)
Preceding gene: 182681446
Following gene: 182681452
Centisome position: 42.08
GC content: 45.86
Gene sequence:
>471_bases ATGAGCTATATCAACCAAGATGAAATCCATGGAATTCTTATACAGACTGGTAGCGAACGAGTGCTATTACCAAATGCGGT GGTGGCTGAGGTAATGTCGGGCGTGTCGGTCGAGTCGTTGAACGATGTGCCTTCTTGGTTAGTTGGCAAAATTGTTTGGT ACGCCTGGAAGGTACCGTTGGTTTCCTTTGCTCGCTTTATCGGCCTGGATGAGGAAGTGACTACCCAGAGTAATAAGGTG ATCCTAATGAAGGCGCTTGGCTGTCACTCTGACCTGCCTTATTTTGCTTTACTTACTGGCTCATTCCCTCAGTTGATTTC GGTATCACGTGACAGCCTACTTGCGGATGCATCTGAGGAGATATTACCGCAGGGAGTACATATGCGTGTACTTCTTAGTG AAACTCAAGCGCTATTGCCTGATCTAGATACAATTGAAAATGCCTTACGCAATGTTTGTGGCCACATTTAA
Upstream 100 bases:
>100_bases CGAGCTTGATGGACAATTTTCCGGTAATCCTACCCAACTAGCACATGCTTTAAGTGCACGTTGGCCGACTAAACATTGAT ATGTAAGGAAACTACCTTCA
Downstream 100 bases:
>100_bases CATGTGGTGGGATGAATGTGTTTTGAATTTCTATGTAATTGAAAAGATTACCAAGAGGGCGTGTTTTTTCAGGGTGTGTT TTTTCGTTTTACAAATAAAA
Product: CheW protein
Products: NA
Alternate protein names: Chemotaxis-Related Protein; Chemosensory Pili System Protein ChpC; Chemotaxis Protein; Chemotaxis CheW Protein
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSYINQDEIHGILIQTGSERVLLPNAVVAEVMSGVSVESLNDVPSWLVGKIVWYAWKVPLVSFARFIGLDEEVTTQSNKV ILMKALGCHSDLPYFALLTGSFPQLISVSRDSLLADASEEILPQGVHMRVLLSETQALLPDLDTIENALRNVCGHI
Sequences:
>Translated_156_residues MSYINQDEIHGILIQTGSERVLLPNAVVAEVMSGVSVESLNDVPSWLVGKIVWYAWKVPLVSFARFIGLDEEVTTQSNKV ILMKALGCHSDLPYFALLTGSFPQLISVSRDSLLADASEEILPQGVHMRVLLSETQALLPDLDTIENALRNVCGHI >Mature_155_residues SYINQDEIHGILIQTGSERVLLPNAVVAEVMSGVSVESLNDVPSWLVGKIVWYAWKVPLVSFARFIGLDEEVTTQSNKVI LMKALGCHSDLPYFALLTGSFPQLISVSRDSLLADASEEILPQGVHMRVLLSETQALLPDLDTIENALRNVCGHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17130; Mature: 16999
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYINQDEIHGILIQTGSERVLLPNAVVAEVMSGVSVESLNDVPSWLVGKIVWYAWKVPL CCCCCCCCCCEEEEECCCCEEECCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH VSFARFIGLDEEVTTQSNKVILMKALGCHSDLPYFALLTGSFPQLISVSRDSLLADASEE HHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHH ILPQGVHMRVLLSETQALLPDLDTIENALRNVCGHI HCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SYINQDEIHGILIQTGSERVLLPNAVVAEVMSGVSVESLNDVPSWLVGKIVWYAWKVPL CCCCCCCCCEEEEECCCCEEECCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH VSFARFIGLDEEVTTQSNKVILMKALGCHSDLPYFALLTGSFPQLISVSRDSLLADASEE HHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHH ILPQGVHMRVLLSETQALLPDLDTIENALRNVCGHI HCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA