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The map label for this gene is 182681452

Identifier: 182681452

GI number: 182681452

Start: 1073328

End: 1073765

Strand: Direct

Name: 182681452

Synonym: XfasM23_0903

Alternate gene names: NA

Gene position: 1073328-1073765 (Clockwise)

Preceding gene: 182681447

Following gene: 182681455

Centisome position: 42.33

GC content: 40.41

Gene sequence:

>438_bases
ATGAAACGCATTACTTTTTTCTGCCCATTATTGTTATCGTTGTTACCTGTAAGCTCGGCTATCGCACTGCCATTTCCATT
ACCACTTAATAAGCAATCAGAAATCATTAAAGCGCTTGATCATGGCCTTCCTGTTTCATTTTCGATCGACCTATCCTACT
GTACTCCGGAGGTTGGTACGCTTCCTAGTAGCACGCGTGGTGGTTCACCTATCGAAGGATATCGGCTCACCAACGATGTT
TTGTCATTCGCCGAAGCTAAGTTAGTTGTTGAACAAACTACTGGCAAACCGATTCAGCAAGTCATGCGATACTCTGTGTA
TAAGAATGGCAATGTTCACTTTGAAGCGTACCTATATGACGTTCCGACTTTCGTTCAGAAATCTAAATTTTCTTATAATT
GCTCAATTAATAGTGGTGTGAATTTCTACTTAAATTGA

Upstream 100 bases:

>100_bases
ATTAAAGATTCACATGGGAATATCATTGAGTTTATATATTCTTAAATTCGGTGAACTGCTTTTATGTCACCACCTAACTA
AAATTTAAGGAAATGTCCTG

Downstream 100 bases:

>100_bases
AGTTAGAAATTTTGCTGTCCGATCATATTTAGAAATCAGGACGAGATGGATACCATCTCGTCCTGCCGAGCACTTAGCTC
ATTTATTTTAACCCACGGTT

Product: VirK family protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKRITFFCPLLLSLLPVSSAIALPFPLPLNKQSEIIKALDHGLPVSFSIDLSYCTPEVGTLPSSTRGGSPIEGYRLTNDV
LSFAEAKLVVEQTTGKPIQQVMRYSVYKNGNVHFEAYLYDVPTFVQKSKFSYNCSINSGVNFYLN

Sequences:

>Translated_145_residues
MKRITFFCPLLLSLLPVSSAIALPFPLPLNKQSEIIKALDHGLPVSFSIDLSYCTPEVGTLPSSTRGGSPIEGYRLTNDV
LSFAEAKLVVEQTTGKPIQQVMRYSVYKNGNVHFEAYLYDVPTFVQKSKFSYNCSINSGVNFYLN
>Mature_145_residues
MKRITFFCPLLLSLLPVSSAIALPFPLPLNKQSEIIKALDHGLPVSFSIDLSYCTPEVGTLPSSTRGGSPIEGYRLTNDV
LSFAEAKLVVEQTTGKPIQQVMRYSVYKNGNVHFEAYLYDVPTFVQKSKFSYNCSINSGVNFYLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010694 [H]

Pfam domain/function: PF06903 VirK [H]

EC number: NA

Molecular weight: Translated: 16105; Mature: 16105

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRITFFCPLLLSLLPVSSAIALPFPLPLNKQSEIIKALDHGLPVSFSIDLSYCTPEVGT
CCCCHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCC
LPSSTRGGSPIEGYRLTNDVLSFAEAKLVVEQTTGKPIQQVMRYSVYKNGNVHFEAYLYD
CCCCCCCCCCCCCEEHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEC
VPTFVQKSKFSYNCSINSGVNFYLN
CCHHHHHCCCEEEEEECCCEEEEEC
>Mature Secondary Structure
MKRITFFCPLLLSLLPVSSAIALPFPLPLNKQSEIIKALDHGLPVSFSIDLSYCTPEVGT
CCCCHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCC
LPSSTRGGSPIEGYRLTNDVLSFAEAKLVVEQTTGKPIQQVMRYSVYKNGNVHFEAYLYD
CCCCCCCCCCCCCEEHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEC
VPTFVQKSKFSYNCSINSGVNFYLN
CCHHHHHCCCEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2708311 [H]