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The map label for this gene is rpiA [H]

Identifier: 182681393

GI number: 182681393

Start: 996641

End: 997354

Strand: Reverse

Name: rpiA [H]

Synonym: XfasM23_0842

Alternate gene names: 182681393

Gene position: 997354-996641 (Counterclockwise)

Preceding gene: 182681394

Following gene: 182681388

Centisome position: 39.33

GC content: 52.24

Gene sequence:

>714_bases
GTGAACTCAACACAGCCAGCCAATGCCTGTGCGCCTTCCCACATCCCCATCATCATTGATAACCCCATGAGCGAAGCAAA
ACGGCGCGCCGCCGAAAAGGCCATCGAATACGTCGAGAACGATATGATTATCGGCGTCGGCACCGGCTCAACAGTCGCCT
ACTTCATCGACGCACTAGGACACACCCCAAAACGCATCAAAGGTGCAGTATCCAGCTCCGAACAGAGCACAGCACATTTA
AAACAACACGGAATTGAAGTCCTGGAACTCAATCATACCGGAACACTCCCACTCTATGTGGACGGTGCAGACGAGTGCGA
CCCTTACAAACGCCTTATCAAAGGAGGCGGCGCATCATTAACACGCGAGAAGATCATCGCTGAAGCAAGCAAACAATTCA
TTTGTATCATCGACCCAAACAAACAGGTAGCAACACTAGGCAAGTTCCCACTACCCATCGAAGTGATCCCAATGGCACGC
AGCTTGGTTGCAAGGCAAATCATGGCACGTACCGACGGTCAACCAGTATGGCGTGAAGGGGTCATTACAGATAACGGCAA
CGTTATCCTGGATGTACATCACTTATGCATCACCGACCCGGTAAAGCTAGAGCAAGAACTCAATCAAATCCCAGGGGTCG
TCTGCGTCGGCCTGTTCGCCCGTCGCTGTGCGGACCTAGTTATCATCGGCAGCGAACCGCCGCACATACTCTGA

Upstream 100 bases:

>100_bases
CCAAAACCCTCGGTGAAGGCTTTCCACTGATCACACGCGGCAACCGGCTTTCCGTATTCCCGGTCACTACGAGCCAATGG
AAATTGCTACTGTCACTAGA

Downstream 100 bases:

>100_bases
ACCCTCCCCCATCGTCTTAAACACTATCCCCATATAATGCATAAACGATCTATAGCAGTGAAAAGTACGCGCTGCGTTCA
ATGTCAAATCCCTGCAAAGC

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNSTQPANACAPSHIPIIIDNPMSEAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGHTPKRIKGAVSSSEQSTAHL
KQHGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQVATLGKFPLPIEVIPMAR
SLVARQIMARTDGQPVWREGVITDNGNVILDVHHLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSEPPHIL

Sequences:

>Translated_237_residues
MNSTQPANACAPSHIPIIIDNPMSEAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGHTPKRIKGAVSSSEQSTAHL
KQHGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQVATLGKFPLPIEVIPMAR
SLVARQIMARTDGQPVWREGVITDNGNVILDVHHLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSEPPHIL
>Mature_237_residues
MNSTQPANACAPSHIPIIIDNPMSEAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGHTPKRIKGAVSSSEQSTAHL
KQHGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQVATLGKFPLPIEVIPMAR
SLVARQIMARTDGQPVWREGVITDNGNVILDVHHLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSEPPHIL

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=211, Percent_Identity=36.4928909952607, Blast_Score=109, Evalue=2e-24,
Organism=Escherichia coli, GI1789280, Length=207, Percent_Identity=58.4541062801932, Blast_Score=246, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI17551758, Length=224, Percent_Identity=36.1607142857143, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6324669, Length=222, Percent_Identity=33.7837837837838, Blast_Score=107, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281364072, Length=205, Percent_Identity=31.7073170731707, Blast_Score=91, Evalue=9e-19,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF00455 DeoR; PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 25667; Mature: 25667

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTQPANACAPSHIPIIIDNPMSEAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALG
CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHC
HTPKRIKGAVSSSEQSTAHLKQHGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASL
CCHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCHHHHHHCCCCCCH
TREKIIAEASKQFICIIDPNKQVATLGKFPLPIEVIPMARSLVARQIMARTDGQPVWREG
HHHHHHHHCCCCEEEEECCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHCC
VITDNGNVILDVHHLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSEPPHIL
EEECCCCEEEEEEHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCCCC
>Mature Secondary Structure
MNSTQPANACAPSHIPIIIDNPMSEAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALG
CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHC
HTPKRIKGAVSSSEQSTAHLKQHGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASL
CCHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCHHHHHHCCCCCCH
TREKIIAEASKQFICIIDPNKQVATLGKFPLPIEVIPMARSLVARQIMARTDGQPVWREG
HHHHHHHHCCCCEEEEECCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHCC
VITDNGNVILDVHHLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSEPPHIL
EEECCCCEEEEEEHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]