| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681370
Identifier: 182681370
GI number: 182681370
Start: 966011
End: 966595
Strand: Reverse
Name: 182681370
Synonym: XfasM23_0818
Alternate gene names: NA
Gene position: 966595-966011 (Counterclockwise)
Preceding gene: 182681373
Following gene: 182681369
Centisome position: 38.12
GC content: 48.03
Gene sequence:
>585_bases ATGCTATTCAGACTGAACGGCCATGCACCCTTTGATGTGCAGAAATACCCTTGGACAAACATCGCTCCACCAGACATTTT CACCACTGTGGTAATAAAACTCGAACACCAAAACACCAACACCAAGTACAAACACATCACCCAACACCGTCATATCTACT TAGAAACAGCACCTGGACACACACATATCACCGCACTGCCCCATGAATTTAATGCCCCACTACGTCACTATCGAAACAAG AACACCCCGATGAAAGCCCGTCTGTTCCTGCCCATCCTAATCATGTCTGCGATCAGTGGCTGCGCAACGTACACTTATAG CAATGGCTACTACCACGGCACACCAACGGTGGAGTACCACTACCCACCAAACTATTACTACCCCCACGGCTATGGGATAC ATGATTTATTCAATTATCCGATACCACCCATCTATCCCCGAGACTTCTATCGCACCCACATTCATCTCCCCTACCAGCAA AGACCCCATCATGACCCAAGCCGACCACTGCCACCAAAACAACCCATAAAGCAGGAGCAGCCCAACCATATCGAAATGAG ATTACGTGACAAACAACGCATTTAG
Upstream 100 bases:
>100_bases GATTCACGTCGCCGCCGTTAAGCACCACCGCCACGACAACCATAACCGACAATGAAGAATAACGAGATATCAATGCAATT CCATCTATTTTTAAGATCCA
Downstream 100 bases:
>100_bases CGCAATCAGCACTTGCATCTCAGGGAGCATTACCTACATCGTGAACGCGTTGTGAACTCCAGCATCTGTTTCTGACTTGG TGTTACTGAGCGTTTAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MLFRLNGHAPFDVQKYPWTNIAPPDIFTTVVIKLEHQNTNTKYKHITQHRHIYLETAPGHTHITALPHEFNAPLRHYRNK NTPMKARLFLPILIMSAISGCATYTYSNGYYHGTPTVEYHYPPNYYYPHGYGIHDLFNYPIPPIYPRDFYRTHIHLPYQQ RPHHDPSRPLPPKQPIKQEQPNHIEMRLRDKQRI
Sequences:
>Translated_194_residues MLFRLNGHAPFDVQKYPWTNIAPPDIFTTVVIKLEHQNTNTKYKHITQHRHIYLETAPGHTHITALPHEFNAPLRHYRNK NTPMKARLFLPILIMSAISGCATYTYSNGYYHGTPTVEYHYPPNYYYPHGYGIHDLFNYPIPPIYPRDFYRTHIHLPYQQ RPHHDPSRPLPPKQPIKQEQPNHIEMRLRDKQRI >Mature_194_residues MLFRLNGHAPFDVQKYPWTNIAPPDIFTTVVIKLEHQNTNTKYKHITQHRHIYLETAPGHTHITALPHEFNAPLRHYRNK NTPMKARLFLPILIMSAISGCATYTYSNGYYHGTPTVEYHYPPNYYYPHGYGIHDLFNYPIPPIYPRDFYRTHIHLPYQQ RPHHDPSRPLPPKQPIKQEQPNHIEMRLRDKQRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23109; Mature: 23109
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFRLNGHAPFDVQKYPWTNIAPPDIFTTVVIKLEHQNTNTKYKHITQHRHIYLETAPGH CEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHEEECCCEEEEEEECCCC THITALPHEFNAPLRHYRNKNTPMKARLFLPILIMSAISGCATYTYSNGYYHGTPTVEYH EEEEECCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHEEEEECCCEECCCCEEEEE YPPNYYYPHGYGIHDLFNYPIPPIYPRDFYRTHIHLPYQQRPHHDPSRPLPPKQPIKQEQ CCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCC PNHIEMRLRDKQRI CCEEEEEECCCCCC >Mature Secondary Structure MLFRLNGHAPFDVQKYPWTNIAPPDIFTTVVIKLEHQNTNTKYKHITQHRHIYLETAPGH CEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHEEECCCEEEEEEECCCC THITALPHEFNAPLRHYRNKNTPMKARLFLPILIMSAISGCATYTYSNGYYHGTPTVEYH EEEEECCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHEEEEECCCEECCCCEEEEE YPPNYYYPHGYGIHDLFNYPIPPIYPRDFYRTHIHLPYQQRPHHDPSRPLPPKQPIKQEQ CCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCC PNHIEMRLRDKQRI CCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA