| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is hemK [H]
Identifier: 182681318
GI number: 182681318
Start: 902043
End: 902870
Strand: Reverse
Name: hemK [H]
Synonym: XfasM23_0765
Alternate gene names: 182681318
Gene position: 902870-902043 (Counterclockwise)
Preceding gene: 182681341
Following gene: 182681316
Centisome position: 35.61
GC content: 58.57
Gene sequence:
>828_bases ATGCCATCACCGATCGCTTTGCTTGCCGCCGCCACTGAACGCATTGAGCGAGTCGATGCAGAAGCCTTGCTGTTGCATGC TCTGGACTGCGATCGGGCGTGGCTGTTCACCCATGGGGACATCCCCCTGGCAGCGGCAGCGACGGAGAGCTTCCAAGCGC TCGTGGAGCAACGTGCTCGCGGTATCCCCGTGGCTTATCTGATTGGGCGGCGTGGATTTTGGACGCTTGATGTAATTGTG TCCTCAGCAACGCTGATTCCGCGTGCAGAAACAGAAACGTTGGTCGAACAAGCATTGCAGCGACTCGACCATGCTTCAGA GCGACGCGTGGCCGATCTGGGCACCGGCAGCGGCGCCATTGCACTGGCTATTGCTTGCGAACGGCCGCAAGCACAGGTGT TAGCCACCGATAACAGCGCAGCCGCGCTCGACATTGCCGCACGCAATGCCAGCGCACATGGGCTAAATCATGTGGTGTTT CGAGAAGGCAATTGGTATGAGGCACTGTTGGGGGAACGCTTTGATCTGATCGTCAGCAATCCCCCTTACATTGCCGTCAC TGATCCACATTTGACGCAGGGTGATCTGCGTTTTGAACCACCATCGGCATTGATCTCTGGTGGCGACGGATTGGACGCAC TGCGCATCCTCGCTGCAGGGGCACCAGCACATTTACGGCCAGGGGGTTGGTTAGTGCTGGAGCATGGTTGGGATCAAGGT GCGGCCGTGCGAACATTACTGCACACTGCGGGATTGGTGGCAGTGGCCACCATGCAAGACTTGGAAGCACGCGACCGCGT CACCGTGGGGCGCTGTCCTGGTTTTTAA
Upstream 100 bases:
>100_bases CAGCAATCAGTGTTGCCGTCTTCATTTTCTTAAAGGATGCAGTGATAGGGATGAGGACCGATAATCAGCACCCTGCTTTG CTCCACAATCCAGCCTTTCA
Downstream 100 bases:
>100_bases AAGCACAGCGGTACTGTGTGTCGTACTCAATACAATGCAGGCCATTTTCAAGTCGGCATCCCAGCCAAAGGCTGCTCATC TGTGGAGCGCATTGCGGTCG
Product: protein-(glutamine-N5) methyltransferase, release factor-specific
Products: NA
Alternate protein names: M.XfaHemK2P [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MPSPIALLAAATERIERVDAEALLLHALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDVIV SSATLIPRAETETLVEQALQRLDHASERRVADLGTGSGAIALAIACERPQAQVLATDNSAAALDIAARNASAHGLNHVVF REGNWYEALLGERFDLIVSNPPYIAVTDPHLTQGDLRFEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQG AAVRTLLHTAGLVAVATMQDLEARDRVTVGRCPGF
Sequences:
>Translated_275_residues MPSPIALLAAATERIERVDAEALLLHALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDVIV SSATLIPRAETETLVEQALQRLDHASERRVADLGTGSGAIALAIACERPQAQVLATDNSAAALDIAARNASAHGLNHVVF REGNWYEALLGERFDLIVSNPPYIAVTDPHLTQGDLRFEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQG AAVRTLLHTAGLVAVATMQDLEARDRVTVGRCPGF >Mature_274_residues PSPIALLAAATERIERVDAEALLLHALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDVIVS SATLIPRAETETLVEQALQRLDHASERRVADLGTGSGAIALAIACERPQAQVLATDNSAAALDIAARNASAHGLNHVVFR EGNWYEALLGERFDLIVSNPPYIAVTDPHLTQGDLRFEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQGA AVRTLLHTAGLVAVATMQDLEARDRVTVGRCPGF
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=242, Percent_Identity=30.1652892561983, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1787463, Length=256, Percent_Identity=45.703125, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI87082085, Length=176, Percent_Identity=35.7954545454545, Blast_Score=98, Evalue=7e-22, Organism=Drosophila melanogaster, GI24582226, Length=227, Percent_Identity=32.15859030837, Blast_Score=111, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 29330; Mature: 29198
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPIALLAAATERIERVDAEALLLHALDCDRAWLFTHGDIPLAAAATESFQALVEQRAR CCCCHHHHHHHHHHHHHHCHHHHEEEHCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHC GIPVAYLIGRRGFWTLDVIVSSATLIPRAETETLVEQALQRLDHASERRVADLGTGSGAI CCCEEEEECCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHCCHHHCCCHHCCCCCCEE ALAIACERPQAQVLATDNSAAALDIAARNASAHGLNHVVFREGNWYEALLGERFDLIVSN EEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHCCCEEEEECC PPYIAVTDPHLTQGDLRFEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQG CCEEEEECCCCCCCCEEECCCHHEEECCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCC AAVRTLLHTAGLVAVATMQDLEARDRVTVGRCPGF HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC >Mature Secondary Structure PSPIALLAAATERIERVDAEALLLHALDCDRAWLFTHGDIPLAAAATESFQALVEQRAR CCCHHHHHHHHHHHHHHCHHHHEEEHCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHC GIPVAYLIGRRGFWTLDVIVSSATLIPRAETETLVEQALQRLDHASERRVADLGTGSGAI CCCEEEEECCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHCCHHHCCCHHCCCCCCEE ALAIACERPQAQVLATDNSAAALDIAARNASAHGLNHVVFREGNWYEALLGERFDLIVSN EEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHCCCEEEEECC PPYIAVTDPHLTQGDLRFEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQG CCEEEEECCCCCCCCEEECCCHHEEECCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCC AAVRTLLHTAGLVAVATMQDLEARDRVTVGRCPGF HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]