Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

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The map label for this gene is pip [H]

Identifier: 182681316

GI number: 182681316

Start: 900754

End: 901695

Strand: Reverse

Name: pip [H]

Synonym: XfasM23_0763

Alternate gene names: 182681316

Gene position: 901695-900754 (Counterclockwise)

Preceding gene: 182681318

Following gene: 182681310

Centisome position: 35.56

GC content: 54.67

Gene sequence:

>942_bases
ATGCGTACGCTGTATCCTGAGGTCACCCCTTTCGACCATGGCATGTTGTGTGTTGATGACAGCCACAGGCTCTATTACGA
GCAGTGCGGCAATCCGCATGGCAAGCCCGTTGTGATCCTTCATGGTGGCCCCGGCGGCGGCTGCAATGACAAGATGCGGC
GTTTCCATGATCCCGATAAATACCGCATTGTGTTGTTTGACCAACGCGGTGCCGGGCGTTCGATGCCGCATGCCAACCTG
ACCAATAACACCACCTGGGATCTGGTGGCCGACATTGAGAAACTACGGGTCGCCTTAGGGATTACACGCTGGCAAGTGTT
CGGTGGCAGTTGGGGATCCACCCTGGCGCTGGCTTACGCCCAAACCCATCCTGAGCAAACGACAGAATTAGTGTTACGAG
GCATTTTCATGTTACGCCGCTGGGAATTGGAATGGTTCTATCAGGAGGGGGCGAGCCGTCTGTTTCCAGATGCCTGGGAT
CGTTACATTGCAGCGATCCCGCCGGTAGAGCGCCACGATTTGATCTCGGCTTTTCATCGCCGTCTCACCAGTGACGACGA
GGCCACACGCTTGGCGGCAGCCCAGGCATGGAGCCTCTGGGAAGGGGCAACCAGCTGTTTATACATGGACCAAGATTTCA
TCGCCAGTCACGAAAACCCGCATTTTGCGTTGGCGTTCGCCAGGATTGAGAACCACTATTTTGTGAATGGCGGTTTCTTT
GAGGTGGAAGACCAATTGCTACGCGATGCGCAGCGCATTGCGAATATTCCTGGCGTCATCGTGCATGGTCGCTACGATGT
CGTCTGCCCTCTTCAAAATGCCTGGGACCTGCATAAAGCGTGGCCAAAGGCCAGTTTGAAGATCACCCCAGGTGCAGGTC
ATTCTGCATTTGAACCTCAAAACATTGATGCATTGGTCTGTGCAACGGATTCCTTCGTCTGA

Upstream 100 bases:

>100_bases
TTGCCAATATCTAAAACGACTCAGCGGGGACCGAAGCAGTAATCGAAAACCGTGATTGGTAGTACATTCGCTGTTTACTA
TTTCCTAACAGGTATCGTCT

Downstream 100 bases:

>100_bases
GATCCACACCATGAGCAGGTTCAGTGGCGATGGCTCCTTCTTCCATGAGGTTAACCGAACTCAGCGCTGCGTTCGCACCA
TGTCAATACCCTCAATACCC

Product: proline iminopeptidase

Products: NA

Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRTLYPEVTPFDHGMLCVDDSHRLYYEQCGNPHGKPVVILHGGPGGGCNDKMRRFHDPDKYRIVLFDQRGAGRSMPHANL
TNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQTHPEQTTELVLRGIFMLRRWELEWFYQEGASRLFPDAWD
RYIAAIPPVERHDLISAFHRRLTSDDEATRLAAAQAWSLWEGATSCLYMDQDFIASHENPHFALAFARIENHYFVNGGFF
EVEDQLLRDAQRIANIPGVIVHGRYDVVCPLQNAWDLHKAWPKASLKITPGAGHSAFEPQNIDALVCATDSFV

Sequences:

>Translated_313_residues
MRTLYPEVTPFDHGMLCVDDSHRLYYEQCGNPHGKPVVILHGGPGGGCNDKMRRFHDPDKYRIVLFDQRGAGRSMPHANL
TNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQTHPEQTTELVLRGIFMLRRWELEWFYQEGASRLFPDAWD
RYIAAIPPVERHDLISAFHRRLTSDDEATRLAAAQAWSLWEGATSCLYMDQDFIASHENPHFALAFARIENHYFVNGGFF
EVEDQLLRDAQRIANIPGVIVHGRYDVVCPLQNAWDLHKAWPKASLKITPGAGHSAFEPQNIDALVCATDSFV
>Mature_313_residues
MRTLYPEVTPFDHGMLCVDDSHRLYYEQCGNPHGKPVVILHGGPGGGCNDKMRRFHDPDKYRIVLFDQRGAGRSMPHANL
TNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQTHPEQTTELVLRGIFMLRRWELEWFYQEGASRLFPDAWD
RYIAAIPPVERHDLISAFHRRLTSDDEATRLAAAQAWSLWEGATSCLYMDQDFIASHENPHFALAFARIENHYFVNGGFF
EVEDQLLRDAQRIANIPGVIVHGRYDVVCPLQNAWDLHKAWPKASLKITPGAGHSAFEPQNIDALVCATDSFV

Specific function: Specifically catalyzes the removal of N-terminal proline residues from peptides [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR005944
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.4.11.5 [H]

Molecular weight: Translated: 35519; Mature: 35519

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLYPEVTPFDHGMLCVDDSHRLYYEQCGNPHGKPVVILHGGPGGGCNDKMRRFHDPDK
CCCCCCCCCCCCCCEEEEECCCEEEHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCC
YRIVLFDQRGAGRSMPHANLTNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYA
EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEH
QTHPEQTTELVLRGIFMLRRWELEWFYQEGASRLFPDAWDRYIAAIPPVERHDLISAFHR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHEECCCCCHHHHHHHHHHH
RLTSDDEATRLAAAQAWSLWEGATSCLYMDQDFIASHENPHFALAFARIENHYFVNGGFF
HHCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCCCEEEEEEEECCEEEECCCEE
EVEDQLLRDAQRIANIPGVIVHGRYDVVCPLQNAWDLHKAWPKASLKITPGAGHSAFEPQ
EHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCCCC
NIDALVCATDSFV
CCCEEEEECCCCC
>Mature Secondary Structure
MRTLYPEVTPFDHGMLCVDDSHRLYYEQCGNPHGKPVVILHGGPGGGCNDKMRRFHDPDK
CCCCCCCCCCCCCCEEEEECCCEEEHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCC
YRIVLFDQRGAGRSMPHANLTNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYA
EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEH
QTHPEQTTELVLRGIFMLRRWELEWFYQEGASRLFPDAWDRYIAAIPPVERHDLISAFHR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHEECCCCCHHHHHHHHHHH
RLTSDDEATRLAAAQAWSLWEGATSCLYMDQDFIASHENPHFALAFARIENHYFVNGGFF
HHCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCCCEEEEEEEECCEEEECCCEE
EVEDQLLRDAQRIANIPGVIVHGRYDVVCPLQNAWDLHKAWPKASLKITPGAGHSAFEPQ
EHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCCCC
NIDALVCATDSFV
CCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]