| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681267
Identifier: 182681267
GI number: 182681267
Start: 841159
End: 842343
Strand: Direct
Name: 182681267
Synonym: XfasM23_0712
Alternate gene names: NA
Gene position: 841159-842343 (Clockwise)
Preceding gene: 182681265
Following gene: 182681268
Centisome position: 33.17
GC content: 54.94
Gene sequence:
>1185_bases ATGTGTGCTGATGCCCTTGCCCCCCTGCCTGAAGCGCTTGCCCACAGCGAGCAACTGGCAGCCTATATACGCCAACAGAT AATTCAAAGCGGCGGGGCGATTCCATTCTCTCGTTTTATGGAGCTGGCTTTGTATGCCCCTGGTCTGGGTTATTACAGTG CCGGCGCGAGTAAATTTGGCGAGGCTGGCGATTTTATCACTGCTCCTGAATTGGGATCGCTATTCGCTACAACGGTAGCG AATGCCTTGGCGCCGGTGTTGCAGCAACTCGGTGCGTTGGCGTGTGTGCTCGAATTGGGAGGTGGCAGCGGCGCGTTCGC TGAAATGCTGCTCAAGCGCCTGATGGAACTGCATAGGCTGCCGCAGCGCTATGCGATCCTGGAACCCAGTGCTGAGTTGC GTCAACGTCAGCAATTGCACTTGAAACGCACATTGCCTCCATCCCTTTTCGCCTTGGTTGAATGGGTGGATGCTCCCTTC TCGGAGCAGTGGGATGGCGTGGTGTTTGCCAATGAGGTGATTGATGCCTTACCTGCCTCGCGTTTCACAATACGCGATGG CCAAGTGTACGAGGCAACAGTGCTATTGGATGCACAGCAGCGTTTTGTATCTGGCCAACAGCCAGCCGATGCATTGTTGC ATCAGGCAGTGCGTCATATTGAGCGCGACTTGTCAGTGCGTTTTGCCGACGGTTATTGCTCAGAGGTGTTACCGCAACTG CCGTATTGGGTGCAGGCGGTCGTTGGTGGCCTCAAGCGCGGTGTATTGCTTTTTGTCGATTATGGTTATCCACGTGCCGA GTATTACCGTCCTGAGCGTGACACTGGCACCCTCAGGGCGTTTTACCGGCATCGCGTGCATGATGATTGGTACCGCTGGC CAGGACTACAGGATGTGACTGCTTCGGTGGATTTTACCGCCTTGGCCGAAGCCGGCACCGCTGCTGGTTTTGATATGGCT GGTTATTGTACCCAGGCGAACTTTTTACTCAGTCATGGATTGGATCGGCTGCTTGCTCACGCTGAAGAGGGTGTTGATGA GGTGGCTAAGCTGCTGTTGCGCAACCAAGTGAAGCGCCTTACCTTGCCAAGCGAGATGGGGGAGCGTTTTCAGGTGATGG GGTTTGCTCGTGAGGTAGCGTTTGATCATGCGTTCTTGAAGGGAGACCTGATATGGCGGCTATGA
Upstream 100 bases:
>100_bases ACTTTAGAGGGATCTGACATGTGGGGTTTTACCCTGGAGAAATTGATCTTATTGCTTAGACTATATAGTTGTTAGTTGAT TGCTGAATTTGATTGAATAC
Downstream 100 bases:
>100_bases AACTGTTATTGAGACCGCGTTGGCGACCGCTGCTGTGGCTGAGCTTGTGGATTGCCGCAATCCTGGTCGTCATCATCGCC AGCGTGTTGCCACAGAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MCADALAPLPEALAHSEQLAAYIRQQIIQSGGAIPFSRFMELALYAPGLGYYSAGASKFGEAGDFITAPELGSLFATTVA NALAPVLQQLGALACVLELGGGSGAFAEMLLKRLMELHRLPQRYAILEPSAELRQRQQLHLKRTLPPSLFALVEWVDAPF SEQWDGVVFANEVIDALPASRFTIRDGQVYEATVLLDAQQRFVSGQQPADALLHQAVRHIERDLSVRFADGYCSEVLPQL PYWVQAVVGGLKRGVLLFVDYGYPRAEYYRPERDTGTLRAFYRHRVHDDWYRWPGLQDVTASVDFTALAEAGTAAGFDMA GYCTQANFLLSHGLDRLLAHAEEGVDEVAKLLLRNQVKRLTLPSEMGERFQVMGFAREVAFDHAFLKGDLIWRL
Sequences:
>Translated_394_residues MCADALAPLPEALAHSEQLAAYIRQQIIQSGGAIPFSRFMELALYAPGLGYYSAGASKFGEAGDFITAPELGSLFATTVA NALAPVLQQLGALACVLELGGGSGAFAEMLLKRLMELHRLPQRYAILEPSAELRQRQQLHLKRTLPPSLFALVEWVDAPF SEQWDGVVFANEVIDALPASRFTIRDGQVYEATVLLDAQQRFVSGQQPADALLHQAVRHIERDLSVRFADGYCSEVLPQL PYWVQAVVGGLKRGVLLFVDYGYPRAEYYRPERDTGTLRAFYRHRVHDDWYRWPGLQDVTASVDFTALAEAGTAAGFDMA GYCTQANFLLSHGLDRLLAHAEEGVDEVAKLLLRNQVKRLTLPSEMGERFQVMGFAREVAFDHAFLKGDLIWRL >Mature_394_residues MCADALAPLPEALAHSEQLAAYIRQQIIQSGGAIPFSRFMELALYAPGLGYYSAGASKFGEAGDFITAPELGSLFATTVA NALAPVLQQLGALACVLELGGGSGAFAEMLLKRLMELHRLPQRYAILEPSAELRQRQQLHLKRTLPPSLFALVEWVDAPF SEQWDGVVFANEVIDALPASRFTIRDGQVYEATVLLDAQQRFVSGQQPADALLHQAVRHIERDLSVRFADGYCSEVLPQL PYWVQAVVGGLKRGVLLFVDYGYPRAEYYRPERDTGTLRAFYRHRVHDDWYRWPGLQDVTASVDFTALAEAGTAAGFDMA GYCTQANFLLSHGLDRLLAHAEEGVDEVAKLLLRNQVKRLTLPSEMGERFQVMGFAREVAFDHAFLKGDLIWRL
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43718; Mature: 43718
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCADALAPLPEALAHSEQLAAYIRQQIIQSGGAIPFSRFMELALYAPGLGYYSAGASKFG CCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCHHHCC EAGDFITAPELGSLFATTVANALAPVLQQLGALACVLELGGGSGAFAEMLLKRLMELHRL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC PQRYAILEPSAELRQRQQLHLKRTLPPSLFALVEWVDAPFSEQWDGVVFANEVIDALPAS CHHHEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCC RFTIRDGQVYEATVLLDAQQRFVSGQQPADALLHQAVRHIERDLSVRFADGYCSEVLPQL CEEECCCCEEEEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHC PYWVQAVVGGLKRGVLLFVDYGYPRAEYYRPERDTGTLRAFYRHRVHDDWYRWPGLQDVT HHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHH ASVDFTALAEAGTAAGFDMAGYCTQANFLLSHGLDRLLAHAEEGVDEVAKLLLRNQVKRL CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC TLPSEMGERFQVMGFAREVAFDHAFLKGDLIWRL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MCADALAPLPEALAHSEQLAAYIRQQIIQSGGAIPFSRFMELALYAPGLGYYSAGASKFG CCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCHHHCC EAGDFITAPELGSLFATTVANALAPVLQQLGALACVLELGGGSGAFAEMLLKRLMELHRL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC PQRYAILEPSAELRQRQQLHLKRTLPPSLFALVEWVDAPFSEQWDGVVFANEVIDALPAS CHHHEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCC RFTIRDGQVYEATVLLDAQQRFVSGQQPADALLHQAVRHIERDLSVRFADGYCSEVLPQL CEEECCCCEEEEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHC PYWVQAVVGGLKRGVLLFVDYGYPRAEYYRPERDTGTLRAFYRHRVHDDWYRWPGLQDVT HHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHH ASVDFTALAEAGTAAGFDMAGYCTQANFLLSHGLDRLLAHAEEGVDEVAKLLLRNQVKRL CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC TLPSEMGERFQVMGFAREVAFDHAFLKGDLIWRL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA