Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is engB
Identifier: 182681243
GI number: 182681243
Start: 814703
End: 815362
Strand: Reverse
Name: engB
Synonym: XfasM23_0688
Alternate gene names: 182681243
Gene position: 815362-814703 (Counterclockwise)
Preceding gene: 182681246
Following gene: 182681242
Centisome position: 32.16
GC content: 52.88
Gene sequence:
>660_bases ATGCCACCAAACGCACAGCACAGCCCGCAGACGTGCGATCCTAAACAGATGTCATCACCACTCGAATGTGCCAAATACCT CCTCTCAGCCCACACACCCCATCAACTACCGTCCGATGACGGAAGCGAAGTTGCCTTTGCCGGACGTTCTAATGCTGGAA AATCCAGCGTACTAAACACCTTAACCCGTCAAAACGCACTCGCCCGCGTCTCCAAAACTCCAGGCCGCACCCAGCAACTG GTCTACTTCACAGTGACACCGCAACGCTACCTGGTTGACCTCCCCGGCTATGGCTACGCCAAAGTCCCCAAAGAACTGCA AATACACTGGCAAGCATTTATTGACACCTACTTCCATCACCGCCAATCCCTCCGTGGACTGGTGGTGGTAATGGACATTC GCCACCCACTCAAAGAATACGACCTACAAATGCTCGCCTACGCCAGACAACGCGGCCTACCCGCACAGGCACTACTGACT AAAGCCGACAAACTCGGCAGAGGCCAACAGGCACAAACACTACAAAAAGTGCGCAATGAACTCACCAAACACTTCGCTGA CCATATCAACATACAAACCTTCTCCAGCAAATCGCGCCAAGGTGTGGAGCAATTGCATACAGTGATCGAAACCTGGTTAG GCTTAGCAAGATCCGGCTGA
Upstream 100 bases:
>100_bases ACAGATCTTCATCCCAGAAAAAACAAGCGCAGATCACAGCAACGAATGATCAAAACTTCTTGTTTGTTTGACCCTCAGAC CATCCATTAAAACTGTCCTC
Downstream 100 bases:
>100_bases ATCTAAAAAAACACGCAAACCCATCACAACCCTTTGATTTATATAAAATAGAAAAAATTTTTCACACACAGATAAACACC CATGCGACACCCCTATAGAA
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MPPNAQHSPQTCDPKQMSSPLECAKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQL VYFTVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLT KADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQLHTVIETWLGLARSG
Sequences:
>Translated_219_residues MPPNAQHSPQTCDPKQMSSPLECAKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQL VYFTVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLT KADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQLHTVIETWLGLARSG >Mature_218_residues PPNAQHSPQTCDPKQMSSPLECAKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLV YFTVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLTK ADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQLHTVIETWLGLARSG
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=163, Percent_Identity=31.2883435582822, Blast_Score=74, Evalue=7e-14, Organism=Escherichia coli, GI145693205, Length=188, Percent_Identity=53.1914893617021, Blast_Score=198, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6320543, Length=129, Percent_Identity=31.0077519379845, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 24624; Mature: 24493
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPNAQHSPQTCDPKQMSSPLECAKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNT CCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHH LTRQNALARVSKTPGRTQQLVYFTVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHH HHHHHHHHHHHCCCCCCEEEEEEEECCHHEEEECCCCCCHHCCHHHHHHHHHHHHHHHHH RQSLRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNE HHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH LTKHFADHINIQTFSSKSRQGVEQLHTVIETWLGLARSG HHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPNAQHSPQTCDPKQMSSPLECAKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNT CCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHH LTRQNALARVSKTPGRTQQLVYFTVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHH HHHHHHHHHHHCCCCCCEEEEEEEECCHHEEEECCCCCCHHCCHHHHHHHHHHHHHHHHH RQSLRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNE HHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH LTKHFADHINIQTFSSKSRQGVEQLHTVIETWLGLARSG HHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]